9BCY | pdb_00009bcy

Crystal structure of Mayaro virus capsid C-terminal domain

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AAA], B [auth BBB]	Structural polyprotein	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity structural molecule activity	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host proteolysis metabolic process viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure membrane virion component virion membrane viral capsid icosahedral viral capsid T=4 icosahedral viral capsid host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell cytoplasm cellular anatomical structure membrane virion component virion membrane viral capsid icosahedral viral capsid T=4 icosahedral viral capsid host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell cytoplasm host intracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AAA], B [auth BBB]	IPR002533	Alphavirus E3 spike glycoprotein	Domain
A [auth AAA], B [auth BBB]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
A [auth AAA], B [auth BBB]	IPR042305	Alphavirus E2 glycoprotein, domain B	Homologous Superfamily
A [auth AAA], B [auth BBB]	IPR042306	Alphavirus E2 glycoprotein, domain C	Homologous Superfamily
A [auth AAA], B [auth BBB]	IPR000936	Alphavirus E2 glycoprotein	Family
A [auth AAA], B [auth BBB]	IPR038055	Flaviviral glycoprotein E, dimerisation domain	Homologous Superfamily
A [auth AAA], B [auth BBB]	IPR000930	Peptidase S3, togavirin	Domain
A [auth AAA], B [auth BBB]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A [auth AAA], B [auth BBB]	IPR042304	Alphavirus E2 glycoprotein, domain A	Homologous Superfamily
A [auth AAA], B [auth BBB]	IPR002548	Alphavirus E1 glycoprotein	Domain
A [auth AAA], B [auth BBB]	IPR000336	Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily	Homologous Superfamily
A [auth AAA], B [auth BBB]	IPR036253	Flavivirus glycoprotein, central and dimerisation domain superfamily	Homologous Superfamily
A [auth AAA], B [auth BBB]	IPR043504	Peptidase S1, PA clan, chymotrypsin-like fold	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.