9ZRG | pdb_00009zrg

Structure of naked mole-rat ribosome (non-rotated)


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth Aa]40S ribosomal protein S26---
CC [auth BC]E-tRNA---
BC [auth A8]5.8S ribosomal RNA---
H [auth AY]40S ribosomal protein S24
AC [auth A7]5S ribosomal RNA---
DC [auth A6],
ZB [auth A5]
28S ribosomal RNA---
YB [auth CG]60S ribosomal protein L7a---
XB [auth CE]60S ribosomal protein L6---
WB [auth CH]60S ribosomal protein L9---
VB [auth CJ]Large ribosomal subunit protein uL5
UB [auth Co]60S ribosomal protein L36a
TB [auth Cp]Large ribosomal subunit protein eL43
SB [auth Cn]60S ribosomal protein L41
RB [auth Cm]Ubiquitin-ribosomal protein eL40 fusion protein
G [auth AV]40S ribosomal protein S21
QB [auth CC]60S ribosomal protein L4---
PB [auth Cl]Large ribosomal subunit protein eL39
OB [auth Ck]Large ribosomal subunit protein eL38
NB [auth Cj]Ribosomal protein L37
MB [auth Ci]60S ribosomal protein L36
LB [auth Cg]Large ribosomal subunit protein eL34
KB [auth Cf]60S ribosomal protein L35a---
JB [auth Ce]60S ribosomal protein L32
IB [auth Cd]Large ribosomal subunit protein eL31
HB [auth Cc]60S ribosomal protein L30---
F [auth AA]Small ribosomal subunit protein uS2
GB [auth CF]60S ribosomal protein L7---
FB [auth CB]60S ribosomal protein L3---
EB [auth Cb]Large ribosomal subunit protein eL29
DB [auth Ch]60S ribosomal protein L35---
CB [auth Cr]60S ribosomal protein L28---
BB [auth CZ]60S ribosomal protein L27
AB [auth CY]60S ribosomal protein L26---
ZA [auth CX]Large ribosomal subunit protein uL23
YA [auth CU]Large ribosomal subunit protein eL22
XA [auth CP]60S ribosomal protein L17---
E [auth AB]Small ribosomal subunit protein eS1
WA [auth CT]Large ribosomal subunit protein eL21
VA [auth CS]60S ribosomal protein L18a---
UA [auth CA]Large ribosomal subunit protein uL2
TA [auth CQ]60S ribosomal protein L18---
SA [auth CD]60S ribosomal protein L5---
RA [auth CI]60S ribosomal protein L10-like---
QA [auth CN]Ribosomal protein L15
PA [auth Ca]60S ribosomal protein L27a---
OA [auth CM]60S ribosomal protein L14---
NA [auth CV]Large ribosomal subunit protein uL14
D [auth AL]Small ribosomal subunit protein uS17
MA [auth CL]60S ribosomal protein L13---
LA [auth CO]60S ribosomal protein L13a---
KA [auth Cz]60S ribosomal protein L10a---
JA [auth AQ]Small ribosomal subunit protein uS9
IA [auth AF]Small ribosomal subunit protein uS7
HA [auth Af]Ubiquitin-ribosomal protein eS31 fusion protein
GA [auth AD]40S ribosomal protein S3---
FA [auth Ac]40S ribosomal protein S28---
EA [auth AZ]40S ribosomal protein S25 -
DA [auth AT]Small ribosomal subunit protein eS19
C [auth AN]Small ribosomal subunit protein uS15
CA [auth AP]40S ribosomal protein S15---
BA [auth AR]Small ribosomal subunit protein eS17
AA [auth Ad]Small ribosomal subunit protein uS14
Z [auth AS]Small ribosomal subunit protein uS13
Y [auth AM]40S ribosomal protein S12---
X [auth AK]Small ribosomal subunit protein eS10 -
W [auth AU]40S ribosomal protein S20---
V [auth Ag]Small ribosomal subunit protein RACK1
U [auth CW]Large ribosomal subunit protein eL24
T [auth CR]60S ribosomal protein L19---
B [auth AX]Small ribosomal subunit protein uS12
S [auth B2]18S ribosomal RNA---
R [auth AI]40S ribosomal protein S8---
Q [auth AW]Small ribosomal subunit protein uS8
P [auth AH]40S ribosomal protein S7
O [auth AG]40S ribosomal protein S6
N [auth AC]40S ribosomal protein S2---
M [auth AE]40S ribosomal protein S4, X isoform---
L [auth AJ]Small ribosomal subunit protein uS4
K [auth Ae]Ubiquitin-like protein FUBI
J [auth Ab]40S ribosomal protein S27
A [auth AO]40S ribosomal protein S14---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
H [auth AY]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
H [auth AY]IPR001976Small ribosomal subunit protein eS24Family
H [auth AY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
H [auth AY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
VB [auth CJ]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
VB [auth CJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
VB [auth CJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
VB [auth CJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
VB [auth CJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
VB [auth CJ]IPR002132Large ribosomal subunit protein uL5Family
UB [auth Co]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
UB [auth Co]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
UB [auth Co]IPR000552Large ribosomal subunit protein eL42Family
TB [auth Cp]IPR002674Large ribosomal subunit protein eL43Family
TB [auth Cp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
TB [auth Cp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
SB [auth Cn]IPR007836Large ribosomal subunit protein eS32Family
RB [auth Cm]IPR019956Ubiquitin domainDomain
RB [auth Cm]IPR019954Ubiquitin conserved siteConserved Site
RB [auth Cm]IPR050158Ubiquitin and ubiquitin-likeFamily
RB [auth Cm]IPR001975Large ribosomal subunit protein eL40 domainDomain
RB [auth Cm]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
RB [auth Cm]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
RB [auth Cm]IPR000626Ubiquitin-like domainDomain
G [auth AV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
G [auth AV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
G [auth AV]IPR001931Small ribosomal subunit protein eS21Family
PB [auth Cl]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
PB [auth Cl]IPR000077Large ribosomal subunit protein eL39Family
PB [auth Cl]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
OB [auth Ck]IPR002675Large ribosomal subunit protein eL38Family
OB [auth Ck]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
NB [auth Cj]IPR001569Large ribosomal subunit protein eL37Family
NB [auth Cj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
NB [auth Cj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
NB [auth Cj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
MB [auth Ci]IPR000509Large ribosomal subunit protein eL36Family
MB [auth Ci]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
LB [auth Cg]IPR008195Large ribosomal subunit protein eL34Family
LB [auth Cg]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
LB [auth Cg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
JB [auth Ce]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
JB [auth Ce]IPR001515Large ribosomal subunit protein eL32Family
JB [auth Ce]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
IB [auth Cd]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
IB [auth Cd]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
IB [auth Cd]IPR000054Large ribosomal subunit protein eL31Family
F [auth AA]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
F [auth AA]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
F [auth AA]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
F [auth AA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
F [auth AA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
F [auth AA]IPR001865Small ribosomal subunit protein uS2Family
F [auth AA]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
EB [auth Cb]IPR019541Trappin protein transglutaminase-binding repeatRepeat
EB [auth Cb]IPR002673Large ribosomal subunit protein eL29Family
BB [auth CZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
BB [auth CZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
BB [auth CZ]IPR005824KOWDomain
BB [auth CZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BB [auth CZ]IPR001141Large ribosomal subunit protein eL27Family
BB [auth CZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
ZA [auth CX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
ZA [auth CX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
ZA [auth CX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
ZA [auth CX]IPR019985Large ribosomal subunit protein uL23Family
ZA [auth CX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
ZA [auth CX]IPR013025Large ribosomal subunit protein uL23-likeFamily
YA [auth CU]IPR002671Large ribosomal subunit protein eL22Family
YA [auth CU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
E [auth AB]IPR001593Small ribosomal subunit protein eS1Family
E [auth AB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
E [auth AB]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
WA [auth CT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
WA [auth CT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
WA [auth CT]IPR001147Large ribosomal subunit protein eL21Family
WA [auth CT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
UA [auth CA]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
UA [auth CA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
UA [auth CA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
UA [auth CA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
UA [auth CA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
UA [auth CA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UA [auth CA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
UA [auth CA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
UA [auth CA]IPR002171Large ribosomal subunit protein uL2Family
QA [auth CN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
QA [auth CN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
QA [auth CN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
QA [auth CN]IPR000439Large ribosomal subunit protein eL15Family
NA [auth CV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
NA [auth CV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
NA [auth CV]IPR000218Large ribosomal subunit protein uL14Family
D [auth AL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
D [auth AL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth AL]IPR000266Small ribosomal subunit protein uS17Family
D [auth AL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
D [auth AL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
JA [auth AQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
JA [auth AQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
JA [auth AQ]IPR000754Small ribosomal subunit protein uS9Family
JA [auth AQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IA [auth AF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
IA [auth AF]IPR000235Small ribosomal subunit protein uS7Family
IA [auth AF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
IA [auth AF]IPR023798Small ribosomal subunit protein uS7 domainDomain
IA [auth AF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
HA [auth Af]IPR019954Ubiquitin conserved siteConserved Site
HA [auth Af]IPR000626Ubiquitin-like domainDomain
HA [auth Af]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
HA [auth Af]IPR002906Small ribosomal subunit protein eS31Domain
HA [auth Af]IPR019956Ubiquitin domainDomain
HA [auth Af]IPR050158Ubiquitin and ubiquitin-likeFamily
HA [auth Af]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
HA [auth Af]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EA [auth AZ]IPR004977Small ribosomal subunit protein eS25Family
EA [auth AZ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
DA [auth AT]IPR001266Small ribosomal subunit protein eS19Family
DA [auth AT]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
DA [auth AT]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
DA [auth AT]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
C [auth AN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
C [auth AN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
C [auth AN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
C [auth AN]IPR000589Small ribosomal subunit protein uS15Family
BA [auth AR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
BA [auth AR]IPR001210Small ribosomal subunit protein eS17Family
BA [auth AR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
AA [auth Ad]IPR001209Small ribosomal subunit protein uS14Family
AA [auth Ad]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
AA [auth Ad]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
AA [auth Ad]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
Z [auth AS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
Z [auth AS]IPR001892Small ribosomal subunit protein uS13Family
Z [auth AS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
Z [auth AS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
X [auth AK]IPR037447Small ribosomal subunit protein eS10Family
X [auth AK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
X [auth AK]IPR005326Plectin/eS10, N-terminalDomain
V [auth Ag]IPR045223Small ribosomal subunit protein RACK1-likeFamily
V [auth Ag]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
V [auth Ag]IPR001680WD40 repeatRepeat
V [auth Ag]IPR019775WD40 repeat, conserved siteConserved Site
V [auth Ag]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
V [auth Ag]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
U [auth CW]IPR011017TRASH domainDomain
U [auth CW]IPR056366Large ribosomal subunit protein eL24Family
U [auth CW]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
U [auth CW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
U [auth CW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
B [auth AX]IPR006032Small ribosomal subunit protein uS12Family
B [auth AX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
B [auth AX]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
Q [auth AW]IPR000630Small ribosomal subunit protein uS8Family
Q [auth AW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
Q [auth AW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
P [auth AH]IPR000554Small ribosomal subunit protein eS7Family
P [auth AH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
O [auth AG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
O [auth AG]IPR014401Small ribosomal subunit protein eS6-likeFamily
O [auth AG]IPR001377Small ribosomal subunit protein eS6Family
L [auth AJ]IPR002942RNA-binding S4 domainDomain
L [auth AJ]IPR022801Small ribosomal subunit protein uS4Family
L [auth AJ]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
L [auth AJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
L [auth AJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
L [auth AJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
K [auth Ae]IPR019954Ubiquitin conserved siteConserved Site
K [auth Ae]IPR000626Ubiquitin-like domainDomain
K [auth Ae]IPR006846Small ribosomal subunit protein eS30Family
K [auth Ae]IPR039415Ubiquitin-like protein FUBIDomain
K [auth Ae]IPR019956Ubiquitin domainDomain
K [auth Ae]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
J [auth Ab]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
J [auth Ab]IPR000592Small ribosomal subunit protein eS27Family
J [auth Ab]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily