9ZPC | pdb_00009zpc

Cryo-EM structure of human PI3KC3-C2


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyAPG6 N-terminal segment-like 8090327 3002432 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF04111Apg6 BARA domain (APG6)Apg6 BARA domainIn yeast, 15 Apg proteins coordinate the formation of autophagosomes. Autophagy is a bulk degradation process induced by starvation in eukaryotic cells [1]. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the ...In yeast, 15 Apg proteins coordinate the formation of autophagosomes. Autophagy is a bulk degradation process induced by starvation in eukaryotic cells [1]. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the membrane or in a retrieval step of the carboxypeptidase Y sorting pathway [2]. This entry is the Beta-Alpha repeated, autophagy-specific (BARA) domain [3].
Domain
PF17675Apg6 coiled-coil region (APG6_N)Apg6 coiled-coil region- Coiled-coil
PF00168C2 domain (C2)C2 domainDomain
PF00792Phosphoinositide 3-kinase C2 (PI3K_C2)Phosphoinositide 3-kinase C2Phosphoinositide 3-kinase region postulated to contain a C2 domain. Outlier of Pfam:PF00168 family. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Beclin-1
UV radiation resistance-associated gene protein
Phosphatidylinositol 3-kinase catalytic subunit type 3
Phosphoinositide 3-kinase regulatory subunit 4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR038274Atg6/Beclin C-terminal domain superfamilyHomologous Superfamily
IPR029318Beclin-1, BH3 domainDomain
IPR040455Atg6, BARA domainDomain
IPR007243Atg6/BeclinFamily
IPR041691Atg6/beclin, coiled-coil domainDomain
IPR000008C2 domainDomain
IPR018791UV radiation resistance protein/autophagy-related protein 14Family
IPR035892C2 domain superfamilyHomologous Superfamily
IPR016024Armadillo-type foldHomologous Superfamily
IPR057756Phosphatidylinositol 3-kinase type3/VPS34-likeDomain
IPR008290Phosphatidylinositol 3-kinase, Vps34 typeFamily
IPR015433Phosphatidylinositol 3-/4-kinaseFamily
IPR002420C2 phosphatidylinositol 3-kinase-type domainDomain
IPR000403Phosphatidylinositol 3-/4-kinase, catalytic domainDomain
IPR001263Phosphoinositide 3-kinase, accessory (PIK) domainDomain
IPR018936Phosphatidylinositol 3-/4-kinase, conserved siteConserved Site
IPR042236Phosphoinositide 3-kinase, accessory (PIK) domain superfamilyHomologous Superfamily
IPR036940Phosphatidylinositol 3-/4-kinase, catalytic domain superfamilyHomologous Superfamily
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
IPR035892C2 domain superfamilyHomologous Superfamily
IPR016024Armadillo-type foldHomologous Superfamily
IPR055231PIK3R4-like, middle domainDomain
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR021133HEAT, type 2Repeat
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
IPR011989Armadillo-like helicalHomologous Superfamily
IPR001680WD40 repeatRepeat
IPR000719Protein kinase domainDomain
IPR045162Serine/threonine-protein kinase Vps15-likeFamily
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR008271Serine/threonine-protein kinase, active siteActive Site