9ZB9 | pdb_00009zb9

Cryo-EM Structure of Human GGPPS Bound to Selective Inhibitor CML-07-119

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E [auth G]	SCOP2B Superfamily	Terpenoid synthases	8035279	3001615	SCOP2B (2022-06-29)
D [auth F]	SCOP2B Superfamily	Terpenoid synthases	8035279	3001615	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Terpenoid synthases	8035279	3001615	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Terpenoid synthases	8035279	3001615	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D [auth F], E [auth G], A, B, C, D [auth F], E [auth G], F [auth H]	PF00348	Polyprenyl synthetase (polyprenyl_synt)	Polyprenyl synthetase		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D [auth F], E [auth G], A, B, C, D [auth F], E [auth G], F [auth H]	Geranylgeranyl pyrophosphate synthase	prenyl diphosphate synthase activity dimethylallyltranstransferase activity prenyltransferase activity transferase activity transferase activity, transferring alkyl or aryl (other than methyl) groups catalytic activity geranylgeranyl diphosphate synthase activity (2E,6E)-farnesyl diphosphate synthase activity identical protein binding protein binding binding	primary metabolic process metabolic process cellular process isoprenoid metabolic process lipid metabolic process isoprenoid biosynthetic process lipid biosynthetic process terpenoid biosynthetic process phospholipid biosynthetic process farnesyl diphosphate metabolic process phospholipid metabolic process trans, trans-farnesyl diphosphate biosynthetic process biosynthetic process organophosphate metabolic process primary metabolic process metabolic process cellular process isoprenoid metabolic process lipid metabolic process isoprenoid biosynthetic process lipid biosynthetic process terpenoid biosynthetic process phospholipid biosynthetic process farnesyl diphosphate metabolic process phospholipid metabolic process trans, trans-farnesyl diphosphate biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process dimethylallyl diphosphate metabolic process phosphorus metabolic process terpenoid metabolic process geranyl diphosphate biosynthetic process geranyl diphosphate metabolic process geranylgeranyl diphosphate biosynthetic process geranylgeranyl diphosphate metabolic process	intracellular anatomical structure intracellular membraneless organelle Z disc sarcomere intracellular organelle I band cellular anatomical structure organelle membraneless organelle contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer intracellular anatomical structure intracellular membraneless organelle Z disc sarcomere intracellular organelle I band cellular anatomical structure organelle membraneless organelle contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer supramolecular complex cytosol perinuclear region of cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D [auth F], E [auth G], A, B, C, D [auth F], E [auth G], F [auth H]	IPR008949	Isoprenoid synthase domain superfamily	Homologous Superfamily
A, B, C, D [auth F], E [auth G], A, B, C, D [auth F], E [auth G], F [auth H]	IPR033749	Polyprenyl synthetase, conserved site	Conserved Site
A, B, C, D [auth F], E [auth G], A, B, C, D [auth F], E [auth G], F [auth H]	IPR000092	Polyprenyl synthetase-like	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D [auth F], E [auth G], A, B, C, D [auth F], E [auth G], F [auth H]	: O95749	breast cancer gastric carcinoma ovarian cancer psoriasis congenital muscular dystrophy hepatocellular carcinoma pancreatic intraductal papillary-mucinous carcinoma tuberculosis gastric cancer malignant ependymoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia