9ZA4 | pdb_00009za4

Asymmetrically gated state sheep connexin-50 in DMPC nanodiscs at low pH


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARVPe9za4A1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
BRVPe9za4B1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
CRVPe9za4C1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
DRVPe9za4D1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
ERVPe9za4E1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
GRVPe9za4G1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
HRVPe9za4H1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
JRVPe9za4J1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
LRVPe9za4L1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
KRVPe9za4K1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
IRVPe9za4I1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
FRVPe9za4F1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00029Connexin (Connexin)ConnexinConnexin proteins form gap-junctions between cells. They carry four transmembrane regions, hence why this family now includes Connexin_CCC, which represented the second pair of TMs. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR038359Connexin, N-terminal domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR002266Gap junction alpha-8 protein (Cx50), C-terminalDomain
A, B, C, D, E
IPR000500ConnexinFamily
A, B, C, D, E
IPR019570Connexin, cysteine-rich domainDomain
A, B, C, D, E
IPR017990Connexin, conserved siteConserved Site
A, B, C, D, E
IPR013092Connexin, N-terminalDomain