Cryo-EM structure of Secreted extracellular protein A (SepA) from Shigella flexneri complexed with the fragment antigen binding domain of monoclonal antibody 40
External Resource: Annotation
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02395 | Immunoglobulin A1 protease (Peptidase_S6) | Immunoglobulin A1 protease | This entry represents the N-terminal domain found in serine protease autotransporters Pic, sepA, espP and espC and immunoglobulin A1 protease autotransporter (IgA1) from bacteria. These proteins have been found in virulent strains and are considered ... | Domain | |
| PF24078 | PIC/HAP1/IgA0 second beta-solenoid repeat region (Beta-sol_PIC_HAP1_IgA0_2nd) | PIC/HAP1/IgA0 second beta-solenoid repeat region | - | Repeat | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Serine protease SepA autotransporter | ||||
| Light chain of the fragment antigen binding domain of monoclonal antibody 40 | - | - | - | |
| Heavy chain of the fragment antigen binding domain of monoclonal antibody 40 | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036709 | Autotransporter beta-domain superfamily | Homologous Superfamily | |
| IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
| IPR057393 | PIC/HAP1/IgA0-like, second beta-solenoid repeat region | Domain | |
| IPR005546 | Autotransporter beta-domain | Domain | |
| IPR000710 | Peptidase S6, IgA endopeptidase | Family | |
| IPR006315 | Outer membrane autotransporter barrel domain | Domain | |
| IPR050909 | Bacterial Autotransporter Virulence Factors | Family | |
| IPR012332 | Autotransporter, pectate lyase C-like domain superfamily | Homologous Superfamily | |
| IPR030396 | Peptidase family S6 domain | Domain | |
| IPR011050 | Pectin lyase fold/virulence factor | Homologous Superfamily |














