9Z08 | pdb_00009z08

Isoreticular co-crystal 1 with asymmetrical expanded duplex (31mer) containing separate insert strand with sequence GACGGTAATT

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyWinged helix DNA-binding domain 8002855 3000034 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyWinged helix DNA-binding domain 8002854 3000034 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CRVPe9z08C1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth F]DNA (5'-D(P*GP*TP*AP*AP*TP*TP*AP*CP*CP*G)-3')---
D [auth E]DNA (5'-D(P*GP*AP*CP*GP*GP*TP*AP*AP*TP*T)-3')---
Replication initiation protein -
DNA (5'-D(P*TP*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*G)-3')---
DNA (5'-D(P*AP*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*T*GP*CP*CP*CP*TP*CP*A)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000525Initiator Rep protein, WH1 domainDomain
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily