9YUY | pdb_00009yuy

Structure of the Plasmodium falciparum 20S proteasome in complex with a beta5-selective covalent syringolin analogue inhibitor.

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
Q [auth A], W [auth O]	Proteasome endopeptidase complex	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity	catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process	protein-containing complex proteasome core complex, alpha-subunit complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle protein-containing complex proteasome core complex, alpha-subunit complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
H [auth M], P [auth a]	Proteasome subunit beta	hydrolase activity catalytic activity	catabolic process primary metabolic process proteasomal protein catabolic process protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
G [auth L], O [auth Z]	Proteasome subunit beta	peptidase activity catalytic activity, acting on a protein threonine-type peptidase activity hydrolase activity catalytic activity endopeptidase activity threonine-type endopeptidase activity	catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
F [auth K], N [auth Y]	Proteasome subunit beta	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity	catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
E [auth G], M [auth U]	Proteasome subunit alpha type-3, putative	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity	catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, alpha-subunit complex membrane-bounded organelle intracellular organelle organelle cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, alpha-subunit complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
D [auth F], L [auth T]	Proteasome endopeptidase complex	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity	catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process	protein-containing complex proteasome core complex, alpha-subunit complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular organelle organelle protein-containing complex proteasome core complex, alpha-subunit complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
C [auth E], K [auth S]	Proteasome subunit alpha type	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity	catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex proteasome core complex, alpha-subunit complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex membrane-bounded organelle intracellular organelle organelle cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex proteasome core complex, alpha-subunit complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
B [auth D], J [auth R]	Proteasome subunit alpha type	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity	catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, alpha-subunit complex membrane-bounded organelle intracellular organelle organelle cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, alpha-subunit complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
BA [auth b], V [auth N]	Proteasome subunit beta	hydrolase activity catalytic activity	catabolic process primary metabolic process proteasomal protein catabolic process protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
AA [auth X], U [auth J]	Proteasome subunit beta	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity	catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
T [auth I], Z [auth W]	Proteasome subunit beta	peptidase activity catalytic activity, acting on a protein threonine-type peptidase activity hydrolase activity catalytic activity endopeptidase activity threonine-type endopeptidase activity	catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
S [auth H], Y [auth V]	Proteasome subunit beta type-6, putative	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity	catabolic process primary metabolic process proteasomal protein catabolic process protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
R [auth B], X [auth P]	Proteasome endopeptidase complex	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity	catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, alpha-subunit complex membrane-bounded organelle intracellular organelle organelle cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, alpha-subunit complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
A [auth C], I [auth Q]	Proteasome subunit alpha type	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity endopeptidase activity	catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process proteasomal protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, alpha-subunit complex membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, alpha-subunit complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
Q [auth A], W [auth O]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
Q [auth A], W [auth O]	IPR034642	Proteasome subunit alpha6	Family
Q [auth A], W [auth O]	IPR000426	Proteasome alpha-subunit, N-terminal domain	Domain
Q [auth A], W [auth O]	IPR050115	Proteasome subunit alpha	Family
Q [auth A], W [auth O]	IPR023332	Proteasome alpha-type subunit	Family
Q [auth A], W [auth O]	IPR001353	Proteasome, subunit alpha/beta	Family
H [auth M], P [auth a]	IPR016050	Proteasome beta-type subunit, conserved site	Conserved Site
H [auth M], P [auth a]	IPR023333	Proteasome B-type subunit	Family
H [auth M], P [auth a]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
H [auth M], P [auth a]	IPR001353	Proteasome, subunit alpha/beta	Family
G [auth L], O [auth Z]	IPR016050	Proteasome beta-type subunit, conserved site	Conserved Site
G [auth L], O [auth Z]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
G [auth L], O [auth Z]	IPR023333	Proteasome B-type subunit	Family
G [auth L], O [auth Z]	IPR001353	Proteasome, subunit alpha/beta	Family
G [auth L], O [auth Z]	IPR000243	Peptidase T1A, proteasome beta-subunit	Family
F [auth K], N [auth Y]	IPR016050	Proteasome beta-type subunit, conserved site	Conserved Site
F [auth K], N [auth Y]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
F [auth K], N [auth Y]	IPR050115	Proteasome subunit alpha	Family
F [auth K], N [auth Y]	IPR001353	Proteasome, subunit alpha/beta	Family
F [auth K], N [auth Y]	IPR035206	Proteasome subunit beta 2	Family
E [auth G], M [auth U]	IPR000426	Proteasome alpha-subunit, N-terminal domain	Domain
E [auth G], M [auth U]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
E [auth G], M [auth U]	IPR050115	Proteasome subunit alpha	Family
E [auth G], M [auth U]	IPR001353	Proteasome, subunit alpha/beta	Family
D [auth F], L [auth T]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
D [auth F], L [auth T]	IPR000426	Proteasome alpha-subunit, N-terminal domain	Domain
D [auth F], L [auth T]	IPR050115	Proteasome subunit alpha	Family
D [auth F], L [auth T]	IPR035144	Proteasome subunit alpha 1	Family
D [auth F], L [auth T]	IPR023332	Proteasome alpha-type subunit	Family
D [auth F], L [auth T]	IPR001353	Proteasome, subunit alpha/beta	Family
C [auth E], K [auth S]	IPR033812	Proteasome subunit alpha5	Family
C [auth E], K [auth S]	IPR000426	Proteasome alpha-subunit, N-terminal domain	Domain
C [auth E], K [auth S]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
C [auth E], K [auth S]	IPR050115	Proteasome subunit alpha	Family
C [auth E], K [auth S]	IPR023332	Proteasome alpha-type subunit	Family
C [auth E], K [auth S]	IPR001353	Proteasome, subunit alpha/beta	Family
B [auth D], J [auth R]	IPR000426	Proteasome alpha-subunit, N-terminal domain	Domain
B [auth D], J [auth R]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
B [auth D], J [auth R]	IPR050115	Proteasome subunit alpha	Family
B [auth D], J [auth R]	IPR023332	Proteasome alpha-type subunit	Family
B [auth D], J [auth R]	IPR001353	Proteasome, subunit alpha/beta	Family
BA [auth b], V [auth N]	IPR016050	Proteasome beta-type subunit, conserved site	Conserved Site
BA [auth b], V [auth N]	IPR023333	Proteasome B-type subunit	Family
BA [auth b], V [auth N]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
BA [auth b], V [auth N]	IPR016295	Proteasome subunit beta 4	Family
BA [auth b], V [auth N]	IPR001353	Proteasome, subunit alpha/beta	Family
AA [auth X], U [auth J]	IPR016050	Proteasome beta-type subunit, conserved site	Conserved Site
AA [auth X], U [auth J]	IPR023333	Proteasome B-type subunit	Family
AA [auth X], U [auth J]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
AA [auth X], U [auth J]	IPR001353	Proteasome, subunit alpha/beta	Family
AA [auth X], U [auth J]	IPR033811	Proteasome beta 3 subunit	Family
T [auth I], Z [auth W]	IPR016050	Proteasome beta-type subunit, conserved site	Conserved Site
T [auth I], Z [auth W]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
T [auth I], Z [auth W]	IPR023333	Proteasome B-type subunit	Family
T [auth I], Z [auth W]	IPR001353	Proteasome, subunit alpha/beta	Family
T [auth I], Z [auth W]	IPR000243	Peptidase T1A, proteasome beta-subunit	Family
S [auth H], Y [auth V]	IPR023333	Proteasome B-type subunit	Family
S [auth H], Y [auth V]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
S [auth H], Y [auth V]	IPR001353	Proteasome, subunit alpha/beta	Family
R [auth B], X [auth P]	IPR000426	Proteasome alpha-subunit, N-terminal domain	Domain
R [auth B], X [auth P]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
R [auth B], X [auth P]	IPR050115	Proteasome subunit alpha	Family
R [auth B], X [auth P]	IPR023332	Proteasome alpha-type subunit	Family
R [auth B], X [auth P]	IPR001353	Proteasome, subunit alpha/beta	Family
A [auth C], I [auth Q]	IPR000426	Proteasome alpha-subunit, N-terminal domain	Domain
A [auth C], I [auth Q]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
A [auth C], I [auth Q]	IPR050115	Proteasome subunit alpha	Family
A [auth C], I [auth Q]	IPR023332	Proteasome alpha-type subunit	Family
A [auth C], I [auth Q]	IPR001353	Proteasome, subunit alpha/beta	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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Structure of the Plasmodium falciparum 20S proteasome in complex with a beta5-selective covalent syringolin analogue inhibitor.

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

9YUY | pdb_00009yuy