9YFW | pdb_00009yfw

VPS13A central bridge domain

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B]	Intermembrane lipid transfer protein VPS13A	-	cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation cell surface receptor protein tyrosine kinase signaling pathway cell communication brain-derived neurotrophic factor receptor signaling pathway cellular process signal transduction enzyme-linked receptor protein signaling pathway adult locomotory behavior cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation cell surface receptor protein tyrosine kinase signaling pathway cell communication brain-derived neurotrophic factor receptor signaling pathway cellular process signal transduction enzyme-linked receptor protein signaling pathway adult locomotory behavior behavior multicellular organismal process adult behavior locomotory behavior exploration behavior defense response response to stress inflammatory response neuroinflammatory response localization transport macromolecule localization lipid localization lipid transport establishment of localization catabolic process autophagy metabolic process process utilizing autophagic mechanism cellular component organization organelle organization sperm mitochondrion organization cellular component organization or biogenesis mitochondrion organization system process nervous system process neuromuscular process neuromuscular process controlling balance sperm motility reproductive process cilium movement involved in cell motility cilium or flagellum-dependent cell motility cilium-dependent cell motility flagellated sperm motility microtubule-based movement microtubule-based process cilium movement cell motility developmental process myeloid leukocyte differentiation cellular developmental process hemopoiesis macrophage differentiation cell development mononuclear cell differentiation nervous system development multicellular organism development neurogenesis central nervous system development gliogenesis glial cell differentiation myeloid cell differentiation cell differentiation microglia differentiation anatomical structure development system development leukocyte differentiation response to environmental enrichment response to external stimulus biosynthetic process macromolecule metabolic process gene expression macromolecule biosynthetic process establishment of protein localization cellular localization protein targeting establishment of protein localization to vacuole intracellular transport protein localization to vacuole establishment of protein localization to organelle protein transport establishment of localization in cell protein localization to organelle vacuolar transport intracellular protein localization protein targeting to vacuole intracellular protein transport biological process involved in intraspecies interaction between organisms social behavior secretion establishment of protein localization to extracellular region export from cell protein secretion protein localization to extracellular region secretion by cell homeostatic process erythrocyte differentiation multicellular organismal-level homeostasis immune system process homeostasis of number of cells myeloid cell homeostasis erythrocyte homeostasis protein catabolic process in the vacuole lysosomal protein catabolic process primary metabolic process protein catabolic process protein metabolic process macromolecule catabolic process response to osmotic stress cellular response to chemical stress cellular response to osmotic stress cellular response to environmental stimulus cellular response to chemical stimulus cellular response to stress response to chemical response to abiotic stimulus cellular response to abiotic stimulus motor behavior negative regulation of signaling modulation of chemical synaptic transmission negative regulation of biological process negative regulation of synaptic transmission negative regulation of cell communication synaptic signaling negative regulation of cellular process regulation of biological quality regulation of synaptic plasticity trans-synaptic signaling regulation of signaling cell-cell signaling chemical synaptic transmission regulation of trans-synaptic signaling long-term synaptic depression anterograde trans-synaptic signaling regulation of cell communication maintenance of protein location protein localization to Golgi apparatus maintenance of location maintenance of location in cell maintenance of protein location in cell protein retention in Golgi apparatus cell projection organization plasma membrane bounded cell projection morphogenesis neuron projection development cell morphogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis plasma membrane bounded cell projection organization generation of neurons anatomical structure morphogenesis neuron projection arborization neuron development multicellular organism growth developmental growth growth Golgi to endosome transport post-Golgi vesicle-mediated transport vesicle-mediated transport intercellular transport cytosolic transport Golgi vesicle transport	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle organelle membrane contact site mitochondria-associated endoplasmic reticulum membrane contact site intracellular vesicle membrane-enclosed lumen cytoplasmic vesicle lumen endomembrane system membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle organelle membrane contact site mitochondria-associated endoplasmic reticulum membrane contact site intracellular vesicle membrane-enclosed lumen cytoplasmic vesicle lumen endomembrane system intracellular organelle lumen cytoplasmic vesicle neuronal dense core vesicle lumen vesicle neuronal dense core vesicle vesicle lumen dense core granule secretory granule lumen organelle lumen secretory granule dense core granule lumen secretory vesicle mitochondrial membrane membrane organelle envelope mitochondrial envelope organelle membrane cytosol cell projection sperm midpiece cilium 9+2 motile cilium sperm flagellum motile cilium plasma membrane bounded cell projection organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum endoplasmic reticulum membrane neuron projection vacuolar membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane lysosome Golgi apparatus lipid droplet membraneless organelle intracellular membraneless organelle endosome membrane endosome cytoplasmic vesicle membrane vesicle membrane organelle outer membrane mitochondrial outer membrane outer membrane somatodendritic compartment cell body neuronal cell body

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B]	IPR056748	Intermembrane lipid transfer protein VPS13-like, C-terminal	Domain
A [auth B]	IPR026854	Vacuolar protein sorting-associated protein 13, N-terminal domain	Domain
A [auth B]	IPR056747	VPS13-like, middle region	Domain
A [auth B]	IPR026847	Vacuolar protein sorting-associated protein 13	Family
A [auth B]	IPR009543	Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth B]	: Q96RL7	chorea-acanthocytosis neuroacanthocytosis ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia primitive neuroectodermal tumor astrocytic tumor Chorea Acanthocytosis Syndrome Cohen syndrome glioblastoma malignant ependymoma oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma Parkinson disease ulcerative colitis atypical teratoid rhabdoid tumor chorea-acanthocytosis neuroacanthocytosis ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia primitive neuroectodermal tumor astrocytic tumor Chorea Acanthocytosis Syndrome Cohen syndrome glioblastoma malignant ependymoma oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma Parkinson disease ulcerative colitis atypical teratoid rhabdoid tumor colorectal cancer invasive ductal breast carcinoma malignant glioma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm pilocytic astrocytoma breast cancer choreatic disease epilepsy large cell medulloblastoma medulloblastoma neurodegenerative disease

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.