9YA1 | pdb_00009ya1

Cryo-EM structure of intraconoidal microtubule 2 (ICMT2) from Toxoplasma gondii (8-nm repeat)

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
EC [auth k], FC [auth l]	TRXL2, TGME49_225790	thioredoxin-disulfide reductase (NADPH) activity protein-disulfide reductase [NAD(P)H] activity oxidoreductase activity, acting on a sulfur group of donors oxidoreductase activity disulfide oxidoreductase activity antioxidant activity catalytic activity, acting on a protein protein-disulfide reductase activity catalytic activity oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	cellular response to stimulus regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of biological process regulation of signal transduction negative regulation of cell communication cell communication negative regulation of Wnt signaling pathway negative regulation of cellular process signal transduction Wnt signaling pathway regulation of signaling cellular response to stimulus regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of biological process regulation of signal transduction negative regulation of cell communication cell communication negative regulation of Wnt signaling pathway negative regulation of cellular process signal transduction Wnt signaling pathway regulation of signaling regulation of biological process cell surface receptor signaling pathway regulation of Wnt signaling pathway negative regulation of response to stimulus biological regulation negative regulation of signal transduction regulation of response to stimulus regulation of cell communication cellular process negative regulation of post-translational protein modification regulation of protein modification process regulation of protein ubiquitination regulation of primary metabolic process protein ubiquitination negative regulation of protein modification process protein metabolic process negative regulation of protein ubiquitination regulation of protein modification by small protein conjugation or removal protein modification process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process negative regulation of protein modification by small protein conjugation or removal regulation of post-translational protein modification regulation of protein metabolic process negative regulation of metabolic process primary metabolic process regulation of macromolecule metabolic process macromolecule modification metabolic process macromolecule metabolic process post-translational protein modification regulation of metabolic process protein modification by small protein conjugation protein modification by small protein conjugation or removal	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle
AC [auth g], BC [auth h], CC [auth i], DC [auth j], GC [auth m], AC [auth g], BC [auth h], CC [auth i], DC [auth j], GC [auth m], HC [auth n], IC [auth o], JC [auth p], KC [auth q], LC [auth r], MC [auth s], NC [auth t], OC [auth u], PC [auth v], QC [auth w], RC [auth x], UB [auth a], VB [auth b], WB [auth c], XB [auth d], YB [auth e], ZB [auth f]	TRXL1, TGME49_232410	thioredoxin-disulfide reductase (NADPH) activity protein-disulfide reductase [NAD(P)H] activity oxidoreductase activity, acting on a sulfur group of donors oxidoreductase activity disulfide oxidoreductase activity antioxidant activity catalytic activity, acting on a protein protein-disulfide reductase activity catalytic activity oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	cellular response to stimulus regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of biological process regulation of signal transduction negative regulation of cell communication cell communication negative regulation of Wnt signaling pathway negative regulation of cellular process signal transduction Wnt signaling pathway regulation of signaling cellular response to stimulus regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of biological process regulation of signal transduction negative regulation of cell communication cell communication negative regulation of Wnt signaling pathway negative regulation of cellular process signal transduction Wnt signaling pathway regulation of signaling regulation of biological process cell surface receptor signaling pathway regulation of Wnt signaling pathway negative regulation of response to stimulus biological regulation negative regulation of signal transduction regulation of response to stimulus regulation of cell communication cellular process negative regulation of post-translational protein modification regulation of protein modification process regulation of protein ubiquitination regulation of primary metabolic process protein ubiquitination negative regulation of protein modification process protein metabolic process negative regulation of protein ubiquitination regulation of protein modification by small protein conjugation or removal protein modification process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process negative regulation of protein modification by small protein conjugation or removal regulation of post-translational protein modification regulation of protein metabolic process negative regulation of metabolic process primary metabolic process regulation of macromolecule metabolic process macromolecule modification metabolic process macromolecule metabolic process post-translational protein modification regulation of metabolic process protein modification by small protein conjugation protein modification by small protein conjugation or removal	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle
QB [auth U], RB [auth V], SB [auth W], TB [auth X]	TLAP4 (thioredoxin-like associated protein), TGME49_201760	-	-	-
NB [auth O], OB [auth P], PB [auth R]	TLAP3 (apical cap protein AC5), TGME49_235380	-	-	-
AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], EA [auth C5], EB [auth E9], G [auth A3], GA [auth C7], HB [auth F1], I [auth A5], IA [auth C9], K [auth A7], LA [auth D1], M [auth A9], NA [auth D3], P [auth B1], PA [auth D5], R [auth B3], RA [auth D7], T [auth B5], TA [auth D9], V [auth B7], WA [auth E1], X [auth B9], YA [auth E3]	Tubulin beta chain	structural constituent of cytoskeleton structural molecule activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding structural constituent of cytoskeleton structural molecule activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding metal ion binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	microtubule-based process cellular process	cellular anatomical structure intracellular anatomical structure cytoplasm polymeric cytoskeletal fiber intracellular membraneless organelle intracellular organelle cytoskeleton organelle membraneless organelle supramolecular fiber microtubule supramolecular polymer supramolecular complex microtubule cytoskeleton
BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], F [auth A2], FA [auth C6], GB [auth F0], H [auth A4], HA [auth C8], J [auth A6], KA [auth D0], L [auth A8], MA [auth D2], O [auth B0], OA [auth D4], Q [auth B2], QA [auth D6], S [auth B4], SA [auth D8], U [auth B6], VA [auth E0], W [auth B8], XA [auth E2], Z [auth C0], ZA [auth E4]	Tubulin alpha chain	structural constituent of cytoskeleton structural molecule activity hydrolase activity catalytic activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding structural constituent of cytoskeleton structural molecule activity hydrolase activity catalytic activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding metal ion binding	microtubule-based process cellular process	cellular anatomical structure intracellular anatomical structure cytoplasm polymeric cytoskeletal fiber intracellular membraneless organelle intracellular organelle cytoskeleton organelle membraneless organelle supramolecular fiber microtubule supramolecular polymer supramolecular complex microtubule cytoskeleton
C [auth A], FB [auth F], IB [auth G], JA [auth D], JB [auth H], C [auth A], FB [auth F], IB [auth G], JA [auth D], JB [auth H], KB [auth I], LB [auth J], MB [auth K], N [auth B], UA [auth E], Y [auth C]	Microtubule associated protein SPM1	cytoskeletal protein binding microtubule binding protein binding binding tubulin binding	-	intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle
A [auth 1], B [auth 2]	ICMAP4, TGME49_225340	structural constituent of cytoskeleton structural molecule activity	-	intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
EC [auth k], FC [auth l]	IPR012336	Thioredoxin-like fold	Domain
EC [auth k], FC [auth l]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
AC [auth g], BC [auth h], CC [auth i], DC [auth j], GC [auth m], AC [auth g], BC [auth h], CC [auth i], DC [auth j], GC [auth m], HC [auth n], IC [auth o], JC [auth p], KC [auth q], LC [auth r], MC [auth s], NC [auth t], OC [auth u], PC [auth v], QC [auth w], RC [auth x], UB [auth a], VB [auth b], WB [auth c], XB [auth d], YB [auth e], ZB [auth f]	IPR012336	Thioredoxin-like fold	Domain
AC [auth g], BC [auth h], CC [auth i], DC [auth j], GC [auth m], AC [auth g], BC [auth h], CC [auth i], DC [auth j], GC [auth m], HC [auth n], IC [auth o], JC [auth p], KC [auth q], LC [auth r], MC [auth s], NC [auth t], OC [auth u], PC [auth v], QC [auth w], RC [auth x], UB [auth a], VB [auth b], WB [auth c], XB [auth d], YB [auth e], ZB [auth f]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], EA [auth C5], EB [auth E9], G [auth A3], GA [auth C7], HB [auth F1], I [auth A5], IA [auth C9], K [auth A7], LA [auth D1], M [auth A9], NA [auth D3], P [auth B1], PA [auth D5], R [auth B3], RA [auth D7], T [auth B5], TA [auth D9], V [auth B7], WA [auth E1], X [auth B9], YA [auth E3]	IPR003008	Tubulin/FtsZ, GTPase domain	Domain
AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], EA [auth C5], EB [auth E9], G [auth A3], GA [auth C7], HB [auth F1], I [auth A5], IA [auth C9], K [auth A7], LA [auth D1], M [auth A9], NA [auth D3], P [auth B1], PA [auth D5], R [auth B3], RA [auth D7], T [auth B5], TA [auth D9], V [auth B7], WA [auth E1], X [auth B9], YA [auth E3]	IPR008280	Tubulin/FtsZ, C-terminal	Homologous Superfamily
AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], EA [auth C5], EB [auth E9], G [auth A3], GA [auth C7], HB [auth F1], I [auth A5], IA [auth C9], K [auth A7], LA [auth D1], M [auth A9], NA [auth D3], P [auth B1], PA [auth D5], R [auth B3], RA [auth D7], T [auth B5], TA [auth D9], V [auth B7], WA [auth E1], X [auth B9], YA [auth E3]	IPR037103	Tubulin/FtsZ-like, C-terminal domain	Homologous Superfamily
AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], EA [auth C5], EB [auth E9], G [auth A3], GA [auth C7], HB [auth F1], I [auth A5], IA [auth C9], K [auth A7], LA [auth D1], M [auth A9], NA [auth D3], P [auth B1], PA [auth D5], R [auth B3], RA [auth D7], T [auth B5], TA [auth D9], V [auth B7], WA [auth E1], X [auth B9], YA [auth E3]	IPR017975	Tubulin, conserved site	Conserved Site
AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], EA [auth C5], EB [auth E9], G [auth A3], GA [auth C7], HB [auth F1], I [auth A5], IA [auth C9], K [auth A7], LA [auth D1], M [auth A9], NA [auth D3], P [auth B1], PA [auth D5], R [auth B3], RA [auth D7], T [auth B5], TA [auth D9], V [auth B7], WA [auth E1], X [auth B9], YA [auth E3]	IPR000217	Tubulin	Family
AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], EA [auth C5], EB [auth E9], G [auth A3], GA [auth C7], HB [auth F1], I [auth A5], IA [auth C9], K [auth A7], LA [auth D1], M [auth A9], NA [auth D3], P [auth B1], PA [auth D5], R [auth B3], RA [auth D7], T [auth B5], TA [auth D9], V [auth B7], WA [auth E1], X [auth B9], YA [auth E3]	IPR023123	Tubulin, C-terminal	Homologous Superfamily
AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], EA [auth C5], EB [auth E9], G [auth A3], GA [auth C7], HB [auth F1], I [auth A5], IA [auth C9], K [auth A7], LA [auth D1], M [auth A9], NA [auth D3], P [auth B1], PA [auth D5], R [auth B3], RA [auth D7], T [auth B5], TA [auth D9], V [auth B7], WA [auth E1], X [auth B9], YA [auth E3]	IPR002453	Beta tubulin	Family
AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], EA [auth C5], EB [auth E9], G [auth A3], GA [auth C7], HB [auth F1], I [auth A5], IA [auth C9], K [auth A7], LA [auth D1], M [auth A9], NA [auth D3], P [auth B1], PA [auth D5], R [auth B3], RA [auth D7], T [auth B5], TA [auth D9], V [auth B7], WA [auth E1], X [auth B9], YA [auth E3]	IPR013838	Beta tubulin, autoregulation binding site	Binding Site
AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], EA [auth C5], EB [auth E9], G [auth A3], GA [auth C7], HB [auth F1], I [auth A5], IA [auth C9], K [auth A7], LA [auth D1], M [auth A9], NA [auth D3], P [auth B1], PA [auth D5], R [auth B3], RA [auth D7], T [auth B5], TA [auth D9], V [auth B7], WA [auth E1], X [auth B9], YA [auth E3]	IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	Domain
AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], AA [auth C1], AB [auth E5], CA [auth C3], CB [auth E7], E [auth A1], EA [auth C5], EB [auth E9], G [auth A3], GA [auth C7], HB [auth F1], I [auth A5], IA [auth C9], K [auth A7], LA [auth D1], M [auth A9], NA [auth D3], P [auth B1], PA [auth D5], R [auth B3], RA [auth D7], T [auth B5], TA [auth D9], V [auth B7], WA [auth E1], X [auth B9], YA [auth E3]	IPR036525	Tubulin/FtsZ, GTPase domain superfamily	Homologous Superfamily
BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], F [auth A2], FA [auth C6], GB [auth F0], H [auth A4], HA [auth C8], J [auth A6], KA [auth D0], L [auth A8], MA [auth D2], O [auth B0], OA [auth D4], Q [auth B2], QA [auth D6], S [auth B4], SA [auth D8], U [auth B6], VA [auth E0], W [auth B8], XA [auth E2], Z [auth C0], ZA [auth E4]	IPR003008	Tubulin/FtsZ, GTPase domain	Domain
BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], F [auth A2], FA [auth C6], GB [auth F0], H [auth A4], HA [auth C8], J [auth A6], KA [auth D0], L [auth A8], MA [auth D2], O [auth B0], OA [auth D4], Q [auth B2], QA [auth D6], S [auth B4], SA [auth D8], U [auth B6], VA [auth E0], W [auth B8], XA [auth E2], Z [auth C0], ZA [auth E4]	IPR008280	Tubulin/FtsZ, C-terminal	Homologous Superfamily
BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], F [auth A2], FA [auth C6], GB [auth F0], H [auth A4], HA [auth C8], J [auth A6], KA [auth D0], L [auth A8], MA [auth D2], O [auth B0], OA [auth D4], Q [auth B2], QA [auth D6], S [auth B4], SA [auth D8], U [auth B6], VA [auth E0], W [auth B8], XA [auth E2], Z [auth C0], ZA [auth E4]	IPR037103	Tubulin/FtsZ-like, C-terminal domain	Homologous Superfamily
BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], F [auth A2], FA [auth C6], GB [auth F0], H [auth A4], HA [auth C8], J [auth A6], KA [auth D0], L [auth A8], MA [auth D2], O [auth B0], OA [auth D4], Q [auth B2], QA [auth D6], S [auth B4], SA [auth D8], U [auth B6], VA [auth E0], W [auth B8], XA [auth E2], Z [auth C0], ZA [auth E4]	IPR017975	Tubulin, conserved site	Conserved Site
BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], F [auth A2], FA [auth C6], GB [auth F0], H [auth A4], HA [auth C8], J [auth A6], KA [auth D0], L [auth A8], MA [auth D2], O [auth B0], OA [auth D4], Q [auth B2], QA [auth D6], S [auth B4], SA [auth D8], U [auth B6], VA [auth E0], W [auth B8], XA [auth E2], Z [auth C0], ZA [auth E4]	IPR002452	Alpha tubulin	Family
BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], F [auth A2], FA [auth C6], GB [auth F0], H [auth A4], HA [auth C8], J [auth A6], KA [auth D0], L [auth A8], MA [auth D2], O [auth B0], OA [auth D4], Q [auth B2], QA [auth D6], S [auth B4], SA [auth D8], U [auth B6], VA [auth E0], W [auth B8], XA [auth E2], Z [auth C0], ZA [auth E4]	IPR000217	Tubulin	Family
BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], F [auth A2], FA [auth C6], GB [auth F0], H [auth A4], HA [auth C8], J [auth A6], KA [auth D0], L [auth A8], MA [auth D2], O [auth B0], OA [auth D4], Q [auth B2], QA [auth D6], S [auth B4], SA [auth D8], U [auth B6], VA [auth E0], W [auth B8], XA [auth E2], Z [auth C0], ZA [auth E4]	IPR023123	Tubulin, C-terminal	Homologous Superfamily
BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], F [auth A2], FA [auth C6], GB [auth F0], H [auth A4], HA [auth C8], J [auth A6], KA [auth D0], L [auth A8], MA [auth D2], O [auth B0], OA [auth D4], Q [auth B2], QA [auth D6], S [auth B4], SA [auth D8], U [auth B6], VA [auth E0], W [auth B8], XA [auth E2], Z [auth C0], ZA [auth E4]	IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	Domain
BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], BA [auth C2], BB [auth E6], D [auth A0], DA [auth C4], DB [auth E8], F [auth A2], FA [auth C6], GB [auth F0], H [auth A4], HA [auth C8], J [auth A6], KA [auth D0], L [auth A8], MA [auth D2], O [auth B0], OA [auth D4], Q [auth B2], QA [auth D6], S [auth B4], SA [auth D8], U [auth B6], VA [auth E0], W [auth B8], XA [auth E2], Z [auth C0], ZA [auth E4]	IPR036525	Tubulin/FtsZ, GTPase domain superfamily	Homologous Superfamily
C [auth A], FB [auth F], IB [auth G], JA [auth D], JB [auth H], C [auth A], FB [auth F], IB [auth G], JA [auth D], JB [auth H], KB [auth I], LB [auth J], MB [auth K], N [auth B], UA [auth E], Y [auth C]	IPR033336	Stabilizer of axonemal microtubules 1/2	Family