9Y4H | pdb_00009y4h

Structure of guinea pig ribosome with P/E-tRNA and mRNA


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AO]40S ribosomal protein S14---
B [auth AX]Small ribosomal subunit protein uS12
C [auth AN]40S ribosomal protein S13---
D [auth AL]Small ribosomal subunit protein uS17
E [auth AB]Small ribosomal subunit protein eS1
F [auth AA]40S ribosomal protein SA---
G [auth AV]40S ribosomal protein S21
H [auth AY]40S ribosomal protein S24
I [auth Aa]40S ribosomal protein S26---
J [auth Ab]40S ribosomal protein S27
K [auth Ae]FAU ubiquitin like and ribosomal protein S30 fusion
L [auth AJ]Small ribosomal subunit protein uS4
M [auth AE]40S ribosomal protein S4, X isoform---
N [auth AC]40S ribosomal protein S2---
O [auth AG]40S ribosomal protein S6---
P [auth AH]40S ribosomal protein S7
Q [auth AW]Small ribosomal subunit protein uS8
R [auth AI]40S ribosomal protein S8
S [auth B2]18S rRNA (1803-MER)---
T [auth CW]Large ribosomal subunit protein eL24
U [auth Ag]Small ribosomal subunit protein RACK1
V [auth AU]Small ribosomal subunit protein uS10
W [auth AK]40S ribosomal protein S10---
X [auth AS]Small ribosomal subunit protein uS13
Y [auth Ad]Small ribosomal subunit protein uS14
Z [auth AR]Small ribosomal subunit protein eS17---
AA [auth AP]40S ribosomal protein S15
BA [auth AT]Small ribosomal subunit protein eS19
CA [auth AZ]40S ribosomal protein S25
DA [auth Ac]40S ribosomal protein S28---
EA [auth AD]40S ribosomal protein S3---
FA [auth AF]Small ribosomal subunit protein uS7
GA [auth AQ]Small ribosomal subunit protein uS9
HA [auth CO]60S ribosomal protein L13a---
IA [auth CL]60S ribosomal protein L13---
JA [auth CV]Large ribosomal subunit protein uL14
KA [auth CM]60S ribosomal protein L14---
LA [auth Ca]60S ribosomal protein L27a---
MA [auth CN]Ribosomal protein L15
NA [auth CI]60S ribosomal protein L10-like---
OA [auth CD]60S ribosomal protein L5---
PA [auth CQ]60S ribosomal protein L18---
QA [auth CA]Large ribosomal subunit protein uL2
RA [auth CS]60S ribosomal protein L18a---
SA [auth CT]Large ribosomal subunit protein eL21
TA [auth CP]60S ribosomal protein L17---
UA [auth CU]60S ribosomal protein L22---
VA [auth CX]60S ribosomal protein L23a---
WA [auth CY]Large ribosomal subunit protein uL24
XA [auth CZ]60S ribosomal protein L27---
YA [auth Cr]Large ribosomal subunit protein eL28---
ZA [auth Ch]60S ribosomal protein L35---
AB [auth Cb]60S ribosomal protein L29---
BB [auth CB]60S ribosomal protein L3---
CB [auth CF]60S ribosomal protein L7---
DB [auth Cc]Large ribosomal subunit protein eL30
EB [auth Cd]Large ribosomal subunit protein eL31
FB [auth Ce]Ribosomal protein L32
GB [auth Cf]60S ribosomal protein L35a---
HB [auth Cg]Large ribosomal subunit protein eL34
IB [auth Ci]60S ribosomal protein L36
JB [auth Cj]Ribosomal protein L37
KB [auth Ck]Large ribosomal subunit protein eL38
LB [auth Cl]60S ribosomal protein L39---
MB [auth CC]60S ribosomal protein L4---
NB [auth Cm]Ubiquitin-ribosomal protein eL40 fusion protein
OB [auth Cn]60S ribosomal protein L41
PB [auth Cp]Large ribosomal subunit protein eL43
QB [auth Co]Ribosomal protein L36a
RB [auth CJ]Large ribosomal subunit protein uL5
SB [auth CH]60S ribosomal protein L9---
TB [auth CE]60S ribosomal protein L6---
UB [auth CG]60S ribosomal protein L7a---
VB [auth A5]28S ribosomal RNA---
WB [auth A7]5S ribosomal RNA---
XB [auth A8]5.8S ribosomal RNA---
YB [auth Cw]tRNA---
ZB [auth Dd]mRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth AX]IPR006032Small ribosomal subunit protein uS12Family
B [auth AX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
B [auth AX]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
D [auth AL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
D [auth AL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth AL]IPR000266Small ribosomal subunit protein uS17Family
D [auth AL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
D [auth AL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
E [auth AB]IPR001593Small ribosomal subunit protein eS1Family
E [auth AB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
E [auth AB]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
G [auth AV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
G [auth AV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
G [auth AV]IPR001931Small ribosomal subunit protein eS21Family
H [auth AY]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
H [auth AY]IPR001976Small ribosomal subunit protein eS24Family
H [auth AY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
H [auth AY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
J [auth Ab]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
J [auth Ab]IPR000592Small ribosomal subunit protein eS27Family
J [auth Ab]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
K [auth Ae]IPR019954Ubiquitin conserved siteConserved Site
K [auth Ae]IPR000626Ubiquitin-like domainDomain
K [auth Ae]IPR006846Small ribosomal subunit protein eS30Family
K [auth Ae]IPR039415Ubiquitin-like protein FUBIDomain
K [auth Ae]IPR019956Ubiquitin domainDomain
K [auth Ae]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
L [auth AJ]IPR002942RNA-binding S4 domainDomain
L [auth AJ]IPR022801Small ribosomal subunit protein uS4Family
L [auth AJ]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
L [auth AJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
L [auth AJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
L [auth AJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
P [auth AH]IPR000554Small ribosomal subunit protein eS7Family
P [auth AH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
Q [auth AW]IPR000630Small ribosomal subunit protein uS8Family
Q [auth AW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
Q [auth AW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
R [auth AI]IPR001047Small ribosomal subunit protein eS8Family
R [auth AI]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotaHomologous Superfamily
R [auth AI]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
R [auth AI]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
T [auth CW]IPR011017TRASH domainDomain
T [auth CW]IPR056366Large ribosomal subunit protein eL24Family
T [auth CW]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
T [auth CW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
T [auth CW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
U [auth Ag]IPR019775WD40 repeat, conserved siteConserved Site
U [auth Ag]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
U [auth Ag]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
U [auth Ag]IPR045223Small ribosomal subunit protein RACK1-likeFamily
U [auth Ag]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
U [auth Ag]IPR001680WD40 repeatRepeat
V [auth AU]IPR001848Small ribosomal subunit protein uS10Family
V [auth AU]IPR027486Small ribosomal subunit protein uS10 domainDomain
V [auth AU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
V [auth AU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
V [auth AU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
X [auth AS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
X [auth AS]IPR001892Small ribosomal subunit protein uS13Family
X [auth AS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
X [auth AS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
Y [auth Ad]IPR001209Small ribosomal subunit protein uS14Family
Y [auth Ad]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
Y [auth Ad]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
Y [auth Ad]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
AA [auth AP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AA [auth AP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
AA [auth AP]IPR002222Small ribosomal subunit protein uS19Family
AA [auth AP]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
BA [auth AT]IPR001266Small ribosomal subunit protein eS19Family
BA [auth AT]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
BA [auth AT]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
BA [auth AT]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
CA [auth AZ]IPR004977Small ribosomal subunit protein eS25Family
CA [auth AZ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
FA [auth AF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
FA [auth AF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
FA [auth AF]IPR000235Small ribosomal subunit protein uS7Family
FA [auth AF]IPR023798Small ribosomal subunit protein uS7 domainDomain
FA [auth AF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
GA [auth AQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
GA [auth AQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
GA [auth AQ]IPR000754Small ribosomal subunit protein uS9Family
GA [auth AQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
JA [auth CV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
JA [auth CV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
JA [auth CV]IPR000218Large ribosomal subunit protein uL14Family
MA [auth CN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
MA [auth CN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
MA [auth CN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
MA [auth CN]IPR000439Large ribosomal subunit protein eL15Family
QA [auth CA]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
QA [auth CA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
QA [auth CA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
QA [auth CA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
QA [auth CA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
QA [auth CA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QA [auth CA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
QA [auth CA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
QA [auth CA]IPR002171Large ribosomal subunit protein uL2Family
SA [auth CT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
SA [auth CT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
SA [auth CT]IPR001147Large ribosomal subunit protein eL21Family
SA [auth CT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
WA [auth CY]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
WA [auth CY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
WA [auth CY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
WA [auth CY]IPR005824KOWDomain
WA [auth CY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
WA [auth CY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
DB [auth Cc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
DB [auth Cc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
DB [auth Cc]IPR000231Large ribosomal subunit protein eL30Family
DB [auth Cc]IPR039109Large ribosomal subunit protein eL30-likeFamily
DB [auth Cc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
EB [auth Cd]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
EB [auth Cd]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
EB [auth Cd]IPR000054Large ribosomal subunit protein eL31Family
FB [auth Ce]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
FB [auth Ce]IPR001515Large ribosomal subunit protein eL32Family
FB [auth Ce]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
HB [auth Cg]IPR008195Large ribosomal subunit protein eL34Family
HB [auth Cg]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
HB [auth Cg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
IB [auth Ci]IPR000509Large ribosomal subunit protein eL36Family
IB [auth Ci]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
JB [auth Cj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
JB [auth Cj]IPR001569Large ribosomal subunit protein eL37Family
JB [auth Cj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
JB [auth Cj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
KB [auth Ck]IPR002675Large ribosomal subunit protein eL38Family
KB [auth Ck]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
NB [auth Cm]IPR019956Ubiquitin domainDomain
NB [auth Cm]IPR019954Ubiquitin conserved siteConserved Site
NB [auth Cm]IPR050158Ubiquitin and ubiquitin-likeFamily
NB [auth Cm]IPR001975Large ribosomal subunit protein eL40 domainDomain
NB [auth Cm]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
NB [auth Cm]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
NB [auth Cm]IPR000626Ubiquitin-like domainDomain
OB [auth Cn]IPR007836Large ribosomal subunit protein eS32Family
PB [auth Cp]IPR002674Large ribosomal subunit protein eL43Family
PB [auth Cp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
PB [auth Cp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
QB [auth Co]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
QB [auth Co]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QB [auth Co]IPR000552Large ribosomal subunit protein eL42Family
RB [auth CJ]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
RB [auth CJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
RB [auth CJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
RB [auth CJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
RB [auth CJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
RB [auth CJ]IPR002132Large ribosomal subunit protein uL5Family