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Data API
9XVD
|
pdb_00009xvd
Crystal structure of NFIC homodimer bound to DNA
External Resource: Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
F
,
H
DNA (5'-D(*AP*AP*GP*TP*TP*GP*GP*CP*AP*CP*GP*GP*TP*GP*CP*CP*AP*AP*CP*TP*T)-3')
-
-
-
E
,
G
DNA (5'-D(*AP*AP*GP*TP*TP*GP*GP*CP*AP*CP*CP*GP*TP*GP*CP*CP*AP*AP*CP*TP*T)-3')
-
-
-
A
,
B [auth C]
,
C [auth B]
,
D
Nuclear factor 1 C-type
DNA-binding transcription factor activity, RNA polymerase II-specific
transcription regulator activity
DNA-binding transcription factor activity
DNA binding
sequence-specific DNA binding
binding
double-stranded DNA binding
nucleic acid binding
RNA polymerase II transcription regulatory region sequence-specific DNA binding
cis-regulatory region sequence-specific DNA binding
sequence-specific double-stranded DNA binding
transcription cis-regulatory region binding
transcription regulatory region nucleic acid binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA-binding transcription factor activity, RNA polymerase II-specific
transcription regulator activity
DNA-binding transcription factor activity
DNA binding
sequence-specific DNA binding
binding
double-stranded DNA binding
nucleic acid binding
RNA polymerase II transcription regulatory region sequence-specific DNA binding
cis-regulatory region sequence-specific DNA binding
sequence-specific double-stranded DNA binding
transcription cis-regulatory region binding
transcription regulatory region nucleic acid binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA-binding transcription activator activity, RNA polymerase II-specific
DNA-binding transcription activator activity
Less
nucleobase-containing compound metabolic process
DNA replication
metabolic process
cellular process
primary metabolic process
DNA metabolic process
macromolecule metabolic process
nucleic acid metabolic process
developmental process
anatomical structure morphogenesis
odontogenesis of dentin-containing tooth
odontogenesis
anatomical structure development
animal organ development
nucleobase-containing compound metabolic process
DNA replication
metabolic process
cellular process
primary metabolic process
DNA metabolic process
macromolecule metabolic process
nucleic acid metabolic process
developmental process
anatomical structure morphogenesis
odontogenesis of dentin-containing tooth
odontogenesis
anatomical structure development
animal organ development
animal organ morphogenesis
RNA metabolic process
nucleobase-containing compound biosynthetic process
gene expression
macromolecule biosynthetic process
RNA biosynthetic process
DNA-templated transcription
nucleic acid biosynthetic process
transcription by RNA polymerase II
biosynthetic process
regulation of cellular process
regulation of primary metabolic process
regulation of RNA metabolic process
regulation of nucleobase-containing compound metabolic process
regulation of RNA biosynthetic process
regulation of transcription by RNA polymerase II
regulation of biosynthetic process
regulation of biological process
biological regulation
regulation of macromolecule metabolic process
regulation of gene expression
regulation of macromolecule biosynthetic process
regulation of DNA-templated transcription
regulation of metabolic process
negative regulation of biological process
negative regulation of RNA biosynthetic process
negative regulation of cellular process
negative regulation of nucleobase-containing compound metabolic process
negative regulation of macromolecule metabolic process
negative regulation of DNA-templated transcription
negative regulation of transcription by RNA polymerase II
negative regulation of metabolic process
negative regulation of biosynthetic process
negative regulation of macromolecule biosynthetic process
negative regulation of RNA metabolic process
positive regulation of DNA-templated transcription
positive regulation of biological process
positive regulation of macromolecule biosynthetic process
positive regulation of metabolic process
positive regulation of biosynthetic process
positive regulation of macromolecule metabolic process
positive regulation of cellular process
positive regulation of transcription by RNA polymerase II
positive regulation of RNA metabolic process
positive regulation of RNA biosynthetic process
Less
membrane-bounded organelle
intracellular anatomical structure
nucleus
membrane-enclosed lumen
intracellular membraneless organelle
intracellular membrane-bounded organelle
nucleolus
intracellular organelle lumen
intracellular organelle
cellular anatomical structure
organelle lumen
fibrillar center
organelle
membraneless organelle
membrane-bounded organelle
intracellular anatomical structure
nucleus
membrane-enclosed lumen
intracellular membraneless organelle
intracellular membrane-bounded organelle
nucleolus
intracellular organelle lumen
intracellular organelle
cellular anatomical structure
organelle lumen
fibrillar center
organelle
membraneless organelle
nuclear lumen
nucleoplasm
chromatin
chromosome
Less
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
,
B [auth C]
,
C [auth B]
,
D
IPR003619
MAD homology 1, Dwarfin-type
Domain
A
,
B [auth C]
,
C [auth B]
,
D
IPR019739
CTF transcription factor/nuclear factor 1, conserved site
Conserved Site
A
,
B [auth C]
,
C [auth B]
,
D
IPR019548
CTF transcription factor/nuclear factor 1, N-terminal
Domain
A
,
B [auth C]
,
C [auth B]
,
D
IPR020604
CTF transcription factor/nuclear factor 1, DNA-binding domain
Domain
A
,
B [auth C]
,
C [auth B]
,
D
IPR000647
CTF transcription factor/nuclear factor 1
Family
Pharos: Disease Associations
Pharos Homepage Annotation
Chains
Drug Target  
Associated Disease
A
,
B [auth C]
,
C [auth B]
,
D
Pharos
: 
P08651
prostate cancer
amyotrophic lateral sclerosis
cutaneous lupus erythematosus
invasive ductal breast carcinoma
ovarian cancer
pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia
Prostatic Neoplasms
astrocytic tumor
cutaneous melanoma
large cell medulloblastoma
pancreatic intraductal papillary-mucinous carcinoma
primitive neuroectodermal tumor
psoriasis
atypical teratoid rhabdoid tumor
glioblastoma
prostate cancer
amyotrophic lateral sclerosis
cutaneous lupus erythematosus
invasive ductal breast carcinoma
ovarian cancer
pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia
Prostatic Neoplasms
astrocytic tumor
cutaneous melanoma
large cell medulloblastoma
pancreatic intraductal papillary-mucinous carcinoma
primitive neuroectodermal tumor
psoriasis
atypical teratoid rhabdoid tumor
glioblastoma
malignant pancreatic neoplasm
pancreatic intraductal papillary-mucinous neoplasm
tuberculosis
Less
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