9X56 | pdb_00009x56

Crystal structure of RhoGDI2 in complex with Compound 2542

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Sec23_trunk	e9x56A1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Sec23_trunk	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Rho GDP-dissociation inhibitor 2	small GTPase binding protein binding binding enzyme binding GTPase binding GTPase regulator activity enzyme regulator activity GDP-dissociation inhibitor activity nucleoside-triphosphatase regulator activity Rho GDP-dissociation inhibitor activity molecular function regulator activity enzyme activator activity GTPase activator activity molecular function activator activity small GTPase binding protein binding binding enzyme binding GTPase binding GTPase regulator activity enzyme regulator activity GDP-dissociation inhibitor activity nucleoside-triphosphatase regulator activity Rho GDP-dissociation inhibitor activity molecular function regulator activity enzyme activator activity GTPase activator activity molecular function activator activity pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	response to stimulus response to redox state cellular response to redox state multicellular organismal process multi-multicellular organism process negative regulation of locomotion regulation of cell motility regulation of cellular process regulation of trophoblast cell migration regulation of reproductive process reproductive process negative regulation of biological process multicellular organism development ameboidal-type cell migration response to stimulus response to redox state cellular response to redox state multicellular organismal process multi-multicellular organism process negative regulation of locomotion regulation of cell motility regulation of cellular process regulation of trophoblast cell migration regulation of reproductive process reproductive process negative regulation of biological process multicellular organism development ameboidal-type cell migration anatomical structure development regulation of cell migration negative regulation of cellular process cell migration regulation of multicellular organismal process cell motility female pregnancy embryo implantation negative regulation of trophoblast cell migration locomotion negative regulation of cell migration trophoblast cell migration developmental process regulation of biological process biological regulation negative regulation of reproductive process regulation of locomotion negative regulation of cell motility cellular process negative regulation of multicellular organismal process multi-organism reproductive process cellular response to stimulus small GTPase-mediated signal transduction signaling Rho protein signal transduction intracellular signal transduction cell communication intracellular signaling cassette signal transduction regulation of signaling regulation of small GTPase mediated signal transduction regulation of signal transduction regulation of Rho protein signal transduction regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasmic vesicle organelle intracellular vesicle cytoplasm intracellular membrane-bounded organelle vesicle membrane cytoskeleton membraneless organelle intracellular membraneless organelle membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasmic vesicle organelle intracellular vesicle cytoplasm intracellular membrane-bounded organelle vesicle membrane cytoskeleton membraneless organelle intracellular membraneless organelle extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular membrane-bounded organelle cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR024792	Rho GDP-dissociation inhibitor domain superfamily	Homologous Superfamily
A	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A	IPR000406	Rho protein GDP-dissociation inhibitor	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: P52566	acute coronary syndrome HIV infectious disease Liver Cirrhosis, Experimental malignant pancreatic neoplasm osteosarcoma pilocytic astrocytoma Sjogren syndrome Crohn disease diabetes mellitus juvenile dermatomyositis lung carcinoma malignant glioma non-small cell lung carcinoma ovarian cancer psoriasis acute coronary syndrome HIV infectious disease Liver Cirrhosis, Experimental malignant pancreatic neoplasm osteosarcoma pilocytic astrocytoma Sjogren syndrome Crohn disease diabetes mellitus juvenile dermatomyositis lung carcinoma malignant glioma non-small cell lung carcinoma ovarian cancer psoriasis subependymal giant cell astrocytoma astrocytic tumor cystic fibrosis Duchenne muscular dystrophy lymphoplasmacytic lymphoma malignant mesothelioma osteoarthritis pancreatic intraductal papillary-mucinous carcinoma rheumatoid arthritis ulcerative colitis breast cancer dermatomyositis glioblastoma invasive ductal breast carcinoma lung cancer malignant ependymoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.