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 9WJU | pdb_00009wju

Cryo-EM structure of the L. garvieae Man-PTS in complex with the bacteriocin GarQ

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth S]SNF2-rel_dome9wjuS1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: SNF2-rel_domECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth A]Prepeptide GarQ-
B [auth Z],
E [auth G],
G [auth T]		PTS mannose transporter subunit IID-
A [auth Y],
D [auth F],
F [auth S]		Mannose/fructose/sorbose family PTS transporter subunit IIC-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth A]IPR061253Garvicin Q family class II bacteriocin, core domainDomain
C [auth A]IPR007464Bacteriocin, class IIdFamily
C [auth A]IPR010133Bacteriocin-type signal sequenceConserved Site
B [auth Z],
E [auth G],
G [auth T]		IPR050303GatZ/KbaZ carbohydrate metabolismFamily
B [auth Z],
E [auth G],
G [auth T]		IPR004704Phosphotransferase system, mannose/fructose/sorbose family IID componentFamily
A [auth Y],
D [auth F],
F [auth S]		IPR050303GatZ/KbaZ carbohydrate metabolismFamily
A [auth Y],
D [auth F],
F [auth S]		IPR004700Phosphotransferase system, mannose/fructose/sorbose family, IIC subunitFamily