Annotations: 9VRQ

Crystal structure of FOXC2/NFAT1 complex bound to ARRE2 DNA

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth N]	Nuclear factor of activated T-cells, cytoplasmic 2	DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription repressor activity DNA-binding transcription factor activity DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription repressor activity DNA-binding transcription factor activity DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding chromatin binding protein binding 14-3-3 protein binding molecular adaptor activity phosphatase binding enzyme binding DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity	developmental process multicellular organism development multicellular organismal process skeletal system development connective tissue development anatomical structure development animal organ development tissue development cartilage development system development cellular response to stimulus cellular response to stress response to stimulus DNA damage response developmental process multicellular organism development multicellular organismal process skeletal system development connective tissue development anatomical structure development animal organ development tissue development cartilage development system development cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process response to chemical response to xenobiotic stimulus calcineurin-NFAT signaling cascade regulation of biological process regulation of cellular process signaling biological regulation intracellular signal transduction cell communication calcium-mediated signaling intracellular signaling cassette signal transduction calcineurin-mediated signaling immune response-regulating cell surface receptor signaling pathway positive regulation of biological process positive regulation of response to stimulus immune response-activating signaling pathway immune response-regulating signaling pathway positive regulation of immune response regulation of immune system process positive regulation of immune system process cell surface receptor signaling pathway immune response-activating cell surface receptor signaling pathway immune response B cell receptor signaling pathway regulation of response to stimulus immune system process regulation of immune response antigen receptor-mediated signaling pathway activation of immune response regulation of biosynthetic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process transcription by RNA polymerase II lncRNA transcription myotube cell development cellular developmental process cell development muscle cell differentiation myotube differentiation muscle structure development striated muscle cell development muscle cell development cell differentiation striated muscle cell differentiation cell migration cell motility cellular response to metal ion cellular response to chemical stimulus response to metal ion cellular response to calcium ion response to calcium ion regulation of primary metabolic process regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of DNA-templated transcription positive regulation of DNA-templated transcription positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process positive regulation of cellular component organization regulation of cellular component organization regulation of syncytium formation by plasma membrane fusion cell-cell fusion cellular component organization cellular component organization or biogenesis positive regulation of myoblast fusion myoblast fusion syncytium formation by cell-cell fusion regulation of myoblast fusion positive regulation of syncytium formation by plasma membrane fusion smooth muscle cell differentiation regulation of developmental process negative regulation of biological process regulation of smooth muscle cell differentiation negative regulation of muscle cell differentiation regulation of cell differentiation vascular associated smooth muscle cell differentiation negative regulation of cellular process negative regulation of cell differentiation negative regulation of developmental process negative regulation of vascular associated smooth muscle cell differentiation regulation of vascular associated smooth muscle cell differentiation vasculature development circulatory system development negative regulation of smooth muscle cell differentiation regulation of muscle cell differentiation regulation of transcription by RNA polymerase II positive regulation of cell population proliferation positive regulation of B cell proliferation regulation of leukocyte activation regulation of cell activation lymphocyte activation leukocyte proliferation leukocyte activation positive regulation of lymphocyte activation positive regulation of cell activation regulation of B cell proliferation lymphocyte proliferation regulation of B cell activation positive regulation of leukocyte activation positive regulation of mononuclear cell proliferation regulation of multicellular organismal process regulation of lymphocyte proliferation regulation of leukocyte proliferation cell population proliferation B cell activation cell activation positive regulation of lymphocyte proliferation B cell proliferation positive regulation of B cell activation regulation of cell population proliferation mononuclear cell proliferation positive regulation of leukocyte proliferation regulation of mononuclear cell proliferation positive regulation of multicellular organismal process regulation of lymphocyte activation positive regulation of transcription by RNA polymerase II	RNA polymerase II transcription regulator complex membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex transcription regulator complex intracellular membrane-bounded organelle transcription factor AP-1 complex intracellular organelle cellular anatomical structure organelle cytoplasm cytosol RNA polymerase II transcription regulator complex membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex transcription regulator complex intracellular membrane-bounded organelle transcription factor AP-1 complex intracellular organelle cellular anatomical structure organelle cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen membraneless organelle intracellular membraneless organelle chromatin chromosome ribonucleoprotein complex
C [auth D]	ARRE2-AS	-	-	-
B [auth C]	ARRE2-S	-	-	-
A	Forkhead box protein C2	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding chromatin binding promoter-specific chromatin binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding chromatin binding promoter-specific chromatin binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity identical protein binding protein binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding chromatin DNA binding	developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development circulatory system development system development embryonic organ morphogenesis embryonic viscerocranium morphogenesis embryonic cranial skeleton morphogenesis chordate embryonic development embryonic morphogenesis embryo development developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development circulatory system development system development embryonic organ morphogenesis embryonic viscerocranium morphogenesis embryonic cranial skeleton morphogenesis chordate embryonic development embryonic morphogenesis embryo development anatomical structure morphogenesis embryo development ending in birth or egg hatching skeletal system development cranial skeletal system development animal organ morphogenesis embryonic skeletal system development skeletal system morphogenesis embryonic organ development embryonic skeletal system morphogenesis heart growth cell population proliferation developmental growth cardiac muscle tissue development cardiac muscle cell proliferation growth organ growth tissue development striated muscle tissue development muscle cell proliferation cellular process cardiac muscle tissue growth muscle tissue development striated muscle cell proliferation mesoderm development renal filtration cell differentiation kidney epithelium development cellular developmental process glomerular epithelial cell differentiation epithelial cell differentiation renal system development cell differentiation nephron development nephron epithelium development epithelial cell differentiation involved in kidney development epithelium development glomerular epithelium development glomerulus development cell differentiation involved in kidney development podocyte differentiation kidney development blood vessel morphogenesis tube development artery development vasculature development tube morphogenesis artery morphogenesis blood vessel development cellular component organization collagen fibril organization extracellular matrix organization cellular component organization or biogenesis extracellular structure organization external encapsulating structure organization branching morphogenesis of an epithelial tube angiogenesis epithelial tube morphogenesis morphogenesis of an epithelium branching involved in blood vessel morphogenesis tissue morphogenesis morphogenesis of a branching structure anatomical structure formation involved in morphogenesis morphogenesis of a branching epithelium metanephros development ossification regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription regulation of biological process negative regulation of transcription by RNA polymerase II negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process cellular response to stimulus cell surface receptor signaling pathway response to stimulus signaling cell communication Notch signaling pathway signal transduction ventricular cardiac muscle tissue morphogenesis heart morphogenesis muscle structure development ventricular cardiac muscle tissue development cardiac chamber development muscle organ development cardiac chamber morphogenesis muscle tissue morphogenesis cardiac ventricle morphogenesis cardiac muscle tissue morphogenesis cardiac ventricle development muscle organ morphogenesis positive regulation of DNA-templated transcription positive regulation of biological process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process response to hormone response to endogenous stimulus response to chemical positive regulation of locomotion regulation of cell motility cell migration involved in sprouting angiogenesis regulation of blood vessel endothelial cell migration endothelial cell migration positive regulation of cell migration positive regulation of cell motility regulation of cell migration blood vessel endothelial cell migration regulation of endothelial cell migration cell migration positive regulation of cell migration involved in sprouting angiogenesis cell motility locomotion regulation of cell migration involved in sprouting angiogenesis sprouting angiogenesis positive regulation of blood vessel endothelial cell migration regulation of locomotion positive regulation of endothelial cell migration somitogenesis segmentation anterior/posterior pattern specification pattern specification process regionalization somite development sensory organ development eye development visual system development camera-type eye development sensory system development lymphangiogenesis lymph vessel morphogenesis lymph vessel development apoptotic process involved in morphogenesis regulation of developmental process regulation of programmed cell death negative regulation of apoptotic process involved in outflow tract morphogenesis apoptotic process involved in development negative regulation of apoptotic process involved in morphogenesis apoptotic process involved in outflow tract morphogenesis apoptotic process involved in heart morphogenesis negative regulation of programmed cell death negative regulation of developmental process regulation of apoptotic process regulation of apoptotic process involved in outflow tract morphogenesis regulation of apoptotic process involved in development cell death negative regulation of apoptotic process involved in development negative regulation of apoptotic process outflow tract morphogenesis apoptotic process programmed cell death embryonic heart tube development regulation of vasculature development regulation of response to wounding positive regulation of response to stimulus positive regulation of developmental process positive regulation of vascular wound healing vascular wound healing response to stress regulation of response to stress regulation of multicellular organismal process response to wounding regulation of anatomical structure morphogenesis positive regulation of response to wounding wound healing regulation of multicellular organismal development angiogenesis involved in wound healing positive regulation of angiogenesis positive regulation of vasculature development positive regulation of wound healing regulation of angiogenesis regulation of response to stimulus regulation of wound healing positive regulation of multicellular organismal process regulation of vascular wound healing positive regulation of cell adhesion mediated by integrin positive regulation of cell adhesion regulation of cell adhesion mediated by integrin regulation of cell adhesion cell adhesion cell adhesion mediated by integrin regulation of growth regulation of developmental growth regulation of organ growth ureteric bud development mesonephric epithelium development mesonephros development mesonephric tubule development blood vessel remodeling tissue remodeling cellular response to nitrogen compound response to peptide hormone insulin receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway cellular response to endogenous stimulus enzyme-linked receptor protein signaling pathway cellular response to hormone stimulus response to oxygen-containing compound cellular response to peptide hormone stimulus response to nitrogen compound cellular response to oxygen-containing compound cellular response to chemical stimulus response to insulin cellular response to insulin stimulus connective tissue development mesangial cell development cell development kidney vasculature development pericyte cell differentiation renal system vasculature development mesangial cell differentiation glomerular mesangium development glomerular mesangial cell development glomerular mesangial cell differentiation epithelial cell development glomerulus vasculature development stem cell development neural crest cell differentiation neural crest cell development mesenchyme development stem cell differentiation mesenchymal cell differentiation mesodermal cell differentiation mesoderm morphogenesis paraxial mesoderm development mesodermal cell fate commitment paraxial mesodermal cell differentiation paraxial mesoderm morphogenesis mesoderm formation formation of primary germ layer paraxial mesoderm formation mesenchyme morphogenesis gastrulation cell fate commitment involved in formation of primary germ layer paraxial mesodermal cell fate commitment cell fate commitment regulation of tube diameter system process regulation of tube size circulatory system process vascular process in circulatory system blood vessel diameter maintenance regulation of biological quality blood circulation regulation of anatomical structure size endothelium development glomerular endothelium development negative regulation of cold-induced thermogenesis homeostatic process adaptive thermogenesis multicellular organismal-level homeostasis regulation of cold-induced thermogenesis cold-induced thermogenesis temperature homeostasis negative regulation of multicellular organismal process vascular endothelial growth factor receptor signaling pathway	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromatin chromosome membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromatin chromosome membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen nuclear body

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D [auth N]	IPR037059	Rel homology domain (RHD), DNA-binding domain superfamily	Homologous Superfamily
D [auth N]	IPR002909	IPT domain	Domain
D [auth N]	IPR008967	p53-like transcription factor, DNA-binding domain superfamily	Homologous Superfamily
D [auth N]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
D [auth N]	IPR011539	Rel homology domain, DNA-binding domain	Domain
D [auth N]	IPR008366	Nuclear factor of activated T cells (NFAT)	Family
D [auth N]	IPR032397	Rel homology dimerisation domain	Domain
D [auth N]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR018122	Fork head domain conserved site1	Conserved Site
A	IPR001766	Fork head domain	Domain
A	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A	IPR030456	Fork head domain conserved site 2	Conserved Site
A	IPR047391	Forkhead box protein C1/C2-like, forkhead domain	Domain
A	IPR050211	Forkhead box domain-containing protein	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
D [auth N]	: Q13469	nervous system disorder pulmonary hypertension allergic rhinitis malignant ependymoma non-small cell lung carcinoma subependymal giant cell astrocytoma breast cancer medulloblastoma osteosarcoma type 2 diabetes mellitus interstitial cystitis ulcerative colitis
A	: Q99958	lymphedema-distichiasis syndrome tetralogy of fallot Cardiovascular Abnormalities yellow nail syndrome ovarian cancer congenital diaphragmatic hernia lymphatic system disease colorectal cancer hydrops fetalis lymphedema malignant ependymoma osteosarcoma congenital anomaly of kidney and urinary tract cystic fibrosis intellectual disability lymphedema-distichiasis syndrome tetralogy of fallot Cardiovascular Abnormalities yellow nail syndrome ovarian cancer congenital diaphragmatic hernia lymphatic system disease colorectal cancer hydrops fetalis lymphedema malignant ependymoma osteosarcoma congenital anomaly of kidney and urinary tract cystic fibrosis intellectual disability Meige disease

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9VRQ | pdb_00009vrq

Crystal structure of FOXC2/NFAT1 complex bound to ARRE2 DNA

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation