Annotations: 9VE6

The MIDN Catch-IRF4 (F6Y) fusion protein

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Midnolin,Interferon regulatory factor 4	DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription coactivator activity transcription regulator activity transcription coregulator activity DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription coactivator activity transcription regulator activity transcription coregulator activity DNA-binding transcription factor activity DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity protein binding kinase binding enzyme binding molecular adaptor activity	multicellular organismal process regulation of cellular process positive regulation of biological process interleukin-13 production positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process cytokine production regulation of cytokine production regulation of multicellular organismal process positive regulation of macromolecule metabolic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process multicellular organismal process regulation of cellular process positive regulation of biological process interleukin-13 production positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process cytokine production regulation of cytokine production regulation of multicellular organismal process positive regulation of macromolecule metabolic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process positive regulation of interleukin-13 production positive regulation of gene expression positive regulation of multicellular organismal process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process positive regulation of cytokine production regulation of metabolic process regulation of interleukin-13 production RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process immune system process T cell activation cell activation lymphocyte activation leukocyte activation biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response defense response to protozoan response to external stimulus response to biotic stimulus response to protozoan defense response to other organism response to stress response to external biotic stimulus homeostatic process adaptive thermogenesis multicellular organismal-level homeostasis regulation of cold-induced thermogenesis cold-induced thermogenesis temperature homeostasis positive regulation of cold-induced thermogenesis regulation of interleukin-2 production interleukin-2 production positive regulation of interleukin-2 production interleukin-10 production regulation of interleukin-10 production positive regulation of interleukin-10 production positive regulation of DNA-templated transcription regulation of primary metabolic process regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of DNA-templated transcription transcription by RNA polymerase II regulation of transcription by RNA polymerase II regulation of interleukin-4 production positive regulation of interleukin-4 production interleukin-4 production regulation of leukocyte differentiation regulation of alpha-beta T cell activation regulation of leukocyte activation regulation of cell activation mononuclear cell differentiation regulation of cell differentiation lymphocyte differentiation regulation of cell development multicellular organism development cell differentiation regulation of T-helper cell differentiation anatomical structure development alpha-beta T cell activation regulation of immune system process T cell differentiation developmental process T-helper cell differentiation immune response regulation of response to stimulus regulation of immune response leukocyte differentiation cellular developmental process regulation of developmental process cell development regulation of CD4-positive, alpha-beta T cell differentiation regulation of alpha-beta T cell differentiation CD4-positive, alpha-beta T cell differentiation regulation of T cell differentiation alpha-beta T cell differentiation CD4-positive, alpha-beta T cell activation regulation of lymphocyte differentiation regulation of multicellular organismal development hemopoiesis regulation of T cell activation regulation of CD4-positive, alpha-beta T cell activation regulation of hemopoiesis regulation of lymphocyte activation positive regulation of transcription by RNA polymerase II CD4-positive or CD8-positive, alpha-beta T cell lineage commitment adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains cell activation involved in immune response T cell activation involved in immune response alpha-beta T cell activation involved in immune response leukocyte activation involved in immune response CD4-positive, alpha-beta T cell lineage commitment lymphocyte activation involved in immune response alpha-beta T cell lineage commitment T-helper cell lineage commitment T cell differentiation involved in immune response T cell lineage commitment adaptive immune response immune effector process T-helper 17 cell lineage commitment positive T cell selection T cell selection T-helper 17 cell differentiation cell fate commitment T-helper 17 type immune response catabolic process proteasomal protein catabolic process protein catabolic process protein metabolic process proteasomal ubiquitin-independent protein catabolic process macromolecule catabolic process regulation of catalytic activity phosphorylation negative regulation of metabolic process negative regulation of molecular function negative regulation of biological process negative regulation of glucokinase activity negative regulation of catalytic activity negative regulation of phosphate metabolic process regulation of transferase activity negative regulation of kinase activity regulation of molecular function regulation of kinase activity phosphate-containing compound metabolic process negative regulation of cellular process regulation of phosphorylation negative regulation of phosphorylation negative regulation of protein transport regulation of localization establishment of protein localization nitrogen compound transport negative regulation of transport cell communication localization negative regulation of secretion negative regulation of hormone secretion negative regulation of secretion by cell intracellular protein localization regulation of biological quality regulation of peptide hormone secretion negative regulation of peptide hormone secretion regulation of hormone levels establishment of protein localization to extracellular region negative regulation of establishment of protein localization protein secretion establishment of localization regulation of protein secretion regulation of secretion negative regulation of protein secretion regulation of hormone secretion regulation of protein localization regulation of peptide secretion transport signaling negative regulation of signaling hormone secretion negative regulation of cell communication protein localization to extracellular region negative regulation of peptide secretion peptide secretion regulation of secretion by cell secretion by cell signal release negative regulation of protein localization regulation of signaling regulation of transport secretion regulation of peptide transport regulation of establishment of protein localization export from cell cell-cell signaling regulation of protein transport peptide transport negative regulation of insulin secretion protein transport regulation of insulin secretion peptide hormone secretion macromolecule localization hormone transport regulation of cell communication insulin secretion	cellular anatomical structure membrane intracellular anatomical structure cytoplasm cytosol protein-containing complex protein-DNA complex nucleosome intracellular membraneless organelle chromatin chromosome intracellular organelle organelle membraneless organelle cellular anatomical structure membrane intracellular anatomical structure cytoplasm cytosol protein-containing complex protein-DNA complex nucleosome intracellular membraneless organelle chromatin chromosome intracellular organelle organelle membraneless organelle membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen nucleolus
B	Midnolin	protein binding binding kinase binding enzyme binding molecular adaptor activity	catabolic process proteasomal protein catabolic process metabolic process cellular process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process proteasomal ubiquitin-independent protein catabolic process macromolecule catabolic process regulation of biological process regulation of cellular process regulation of catalytic activity phosphorylation catabolic process proteasomal protein catabolic process metabolic process cellular process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process proteasomal ubiquitin-independent protein catabolic process macromolecule catabolic process regulation of biological process regulation of cellular process regulation of catalytic activity phosphorylation negative regulation of metabolic process biological regulation negative regulation of molecular function negative regulation of biological process negative regulation of glucokinase activity negative regulation of catalytic activity negative regulation of phosphate metabolic process regulation of transferase activity negative regulation of kinase activity regulation of molecular function regulation of kinase activity phosphate-containing compound metabolic process negative regulation of cellular process regulation of phosphorylation negative regulation of phosphorylation regulation of metabolic process negative regulation of protein transport regulation of localization establishment of protein localization nitrogen compound transport negative regulation of transport cell communication localization negative regulation of secretion negative regulation of hormone secretion negative regulation of secretion by cell intracellular protein localization regulation of biological quality regulation of peptide hormone secretion negative regulation of peptide hormone secretion regulation of hormone levels establishment of protein localization to extracellular region negative regulation of establishment of protein localization protein secretion establishment of localization regulation of protein secretion regulation of secretion negative regulation of protein secretion regulation of hormone secretion regulation of protein localization regulation of peptide secretion transport signaling negative regulation of signaling hormone secretion negative regulation of cell communication protein localization to extracellular region negative regulation of peptide secretion peptide secretion regulation of secretion by cell secretion by cell signal release negative regulation of protein localization regulation of signaling regulation of transport secretion regulation of peptide transport regulation of establishment of protein localization export from cell cell-cell signaling regulation of protein transport peptide transport negative regulation of insulin secretion protein transport regulation of insulin secretion peptide hormone secretion macromolecule localization hormone transport regulation of cell communication insulin secretion	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle membraneless organelle nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001346	Interferon regulatory factor, DNA-binding domain	Domain
A	IPR019817	Interferon regulatory factor, conserved site	Conserved Site
A	IPR019471	Interferon regulatory factor-3	Domain
A	IPR008984	SMAD/FHA domain superfamily	Homologous Superfamily
A	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A	IPR017855	SMAD-like domain superfamily	Homologous Superfamily
A	IPR039336	Midnolin	Family
A	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
A	IPR000626	Ubiquitin-like domain	Domain
B	IPR039336	Midnolin	Family
B	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
B	IPR000626	Ubiquitin-like domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9VE6 | pdb_00009ve6

The MIDN Catch-IRF4 (F6Y) fusion protein

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage