9V1L | pdb_00009v1l

Cryo- EM structure of large subunit (LSU) of 75S ribosome with P- tRNA from Entamoeba histolytica


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth lC]5S rRNA---
T [auth lT]60S ribosomal protein L18a
I [auth lI]60S ribosomal protein L7, putative
H [auth lH]Large ribosomal subunit protein eL6
G [auth lG]60S ribosomal protein L5, putative
F [auth lF]Large ribosomal subunit protein uL4
E [auth lE]60S ribosomal protein L3, putative
SA [auth sH]P-tRNA---
RA [auth ls]Nascent peptide---
QA [auth lq]60S ribosomal protein L44, putative
PA [auth lp]60S ribosomal protein L40, putative
OA [auth lo]Ribosomal protein L39, putative
NA [auth ln]60S ribosomal protein L38, putative
D [auth lD]Large ribosomal subunit protein uL2
MA [auth lm]60S ribosomal protein L37A, putative
LA [auth ll]60S ribosomal protein L37-A, putative
KA [auth lk]60S ribosomal protein L36, putative
JA [auth lj]60S ribosomal protein L35a, putative
IA [auth li]uL29---
HA [auth lh]60S ribosomal protein L34, putative
GA [auth lg]60S ribosomal protein L32, putative
FA [auth lf]60S ribosomal protein L31, putative
EA [auth le]60S ribosomal protein L30, putative -
DA [auth ld]60S ribosomal protein L29
CA [auth lc]Large ribosomal subunit protein uL15A
BA [auth lb]60S ribosomal protein L27, putative
AA [auth la]60S ribosomal protein L26, putative
Z [auth lZ]60S ribosomal protein L24, putative
Y [auth lY]Ribosomal protein L23A, putative
X [auth lX]60S ribosomal protein L23, putative
W [auth lW]Large ribosomal subunit protein eL22
V [auth lV]60S ribosomal protein L21, putative
U [auth lU]Ribosomal protein L19
B [auth lB]5.8S rRNA---
S [auth lS]60S ribosomal protein L18, putative
R [auth lR]60S ribosomal protein L17, putative
Q [auth lQ]Ribosomal protein L15
P [auth lP]60S ribosomal protein L14, putative
O [auth lO]60S ribosomal protein L13, putative
N [auth lN]60S ribosomal protein L13, putative
M [auth lM]60S ribosomal protein L11, putative
L [auth lL]Ribosomal protein L10, putative
K [auth lK]60S ribosomal protein L9, putative
J [auth lJ]60S ribosomal protein L7a
A [auth lA]25S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
T [auth lT]IPR028877Large ribosomal subunit protein eL20Family
T [auth lT]IPR023573Large ribosomal subunit protein eL20 domainDomain
T [auth lT]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
I [auth lI]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
I [auth lI]IPR039699Large ribosomal subunit protein uL30Family
I [auth lI]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
I [auth lI]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
I [auth lI]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
H [auth lH]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth lH]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
H [auth lH]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth lH]IPR000915Large ribosomal subunit protein eL6Family
G [auth lG]IPR057268Large ribosomal subunit protein uL18Family
G [auth lG]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
G [auth lG]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
F [auth lF]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
F [auth lF]IPR002136Large ribosomal subunit protein uL4Family
F [auth lF]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
F [auth lF]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
F [auth lF]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
E [auth lE]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth lE]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
E [auth lE]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
E [auth lE]IPR000597Large ribosomal subunit protein uL3Family
E [auth lE]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
QA [auth lq]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
QA [auth lq]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth lq]IPR000552Large ribosomal subunit protein eL42Family
PA [auth lp]IPR001975Large ribosomal subunit protein eL40 domainDomain
PA [auth lp]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
PA [auth lp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
OA [auth lo]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
OA [auth lo]IPR000077Large ribosomal subunit protein eL39Family
NA [auth ln]IPR002675Large ribosomal subunit protein eL38Family
NA [auth ln]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
D [auth lD]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
D [auth lD]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth lD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth lD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth lD]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth lD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth lD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth lD]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth lD]IPR002171Large ribosomal subunit protein uL2Family
MA [auth lm]IPR002674Large ribosomal subunit protein eL43Family
MA [auth lm]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth lm]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
MA [auth lm]IPR050522Eukaryotic ribosomal protein eL43Family
LA [auth ll]IPR001569Large ribosomal subunit protein eL37Family
LA [auth ll]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LA [auth ll]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
KA [auth lk]IPR000509Large ribosomal subunit protein eL36Family
KA [auth lk]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
JA [auth lj]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
JA [auth lj]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
JA [auth lj]IPR001780Large ribosomal subunit protein eL33Family
HA [auth lh]IPR008195Large ribosomal subunit protein eL34Family
HA [auth lh]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
GA [auth lg]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
GA [auth lg]IPR001515Large ribosomal subunit protein eL32Family
FA [auth lf]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
FA [auth lf]IPR000054Large ribosomal subunit protein eL31Family
EA [auth le]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
EA [auth le]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth le]IPR000231Large ribosomal subunit protein eL30Family
EA [auth le]IPR039109Large ribosomal subunit protein eL30-likeFamily
EA [auth le]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
DA [auth ld]IPR002673Large ribosomal subunit protein eL29Family
CA [auth lc]IPR021131Large ribosomal subunit protein uL15/eL18Domain
CA [auth lc]IPR030878Large ribosomal subunit protein uL15Family
CA [auth lc]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
CA [auth lc]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
BA [auth lb]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
BA [auth lb]IPR005824KOWDomain
BA [auth lb]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth lb]IPR001141Large ribosomal subunit protein eL27Family
BA [auth lb]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
AA [auth la]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
AA [auth la]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth la]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Z [auth lZ]IPR056366Large ribosomal subunit protein eL24Family
Z [auth lZ]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
Z [auth lZ]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
Y [auth lY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Y [auth lY]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Y [auth lY]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Y [auth lY]IPR013025Large ribosomal subunit protein uL23-likeFamily
X [auth lX]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
X [auth lX]IPR000218Large ribosomal subunit protein uL14Family
X [auth lX]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
W [auth lW]IPR002671Large ribosomal subunit protein eL22Family
W [auth lW]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
V [auth lV]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
V [auth lV]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
V [auth lV]IPR001147Large ribosomal subunit protein eL21Family
V [auth lV]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth lU]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
U [auth lU]IPR057259Ribosomal protein L19e, N-terminal domainDomain
U [auth lU]IPR039547Large ribosomal subunit protein eL19Family
U [auth lU]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
U [auth lU]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
U [auth lU]IPR057260Ribosomal protein L19e, C-terminal domainDomain
U [auth lU]IPR000196Large ribosomal subunit protein eL19 domainDomain
S [auth lS]IPR021131Large ribosomal subunit protein uL15/eL18Domain
S [auth lS]IPR000039Large ribosomal subunit protein eL18Family
S [auth lS]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
R [auth lR]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth lR]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
R [auth lR]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth lR]IPR001063Large ribosomal subunit protein uL22Family
Q [auth lQ]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Q [auth lQ]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
Q [auth lQ]IPR000439Large ribosomal subunit protein eL15Family
P [auth lP]IPR039660Large ribosomal subunit protein eL14Family
P [auth lP]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
P [auth lP]IPR002784Large ribosomal subunit protein eL14 domainDomain
P [auth lP]IPR005824KOWDomain
P [auth lP]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth lO]IPR005822Large ribosomal subunit protein uL13Family
O [auth lO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
O [auth lO]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
N [auth lN]IPR001380Large ribosomal subunit protein eL13Family
M [auth lM]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
M [auth lM]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
M [auth lM]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
M [auth lM]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
M [auth lM]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
M [auth lM]IPR002132Large ribosomal subunit protein uL5Family
L [auth lL]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
L [auth lL]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth lL]IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth lL]IPR047873Large ribosomal subunit protein uL16Family
K [auth lK]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
K [auth lK]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth lK]IPR000702Large ribosomal subunit protein uL6-likeFamily
J [auth lJ]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
J [auth lJ]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth lJ]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth lJ]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth lJ]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
J [auth lJ]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily