Annotations: 9UOU

Crystal structure of the fusion protein of T-lineage protein Themis and adaptor protein Grb2

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth A]	SCOP2B Superfamily	SH3-domain	8032734	3000153	SCOP2B (2022-06-29)
A [auth B]	SCOP2B Superfamily	SH3-domain	8032734	3000153	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth A]	PF00018	SH3 domain (SH3_1)	SH3 domain	SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase Swiss:P12931. The structure is a partly opened beta barrel.	Domain
A [auth B], B [auth A]	PF12736	Cell-cycle sustaining, positive selection, (CABIT)	Cell-cycle sustaining, positive selection,	The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologues (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline- ...	The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologues (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth A]	Protein THEMIS,Growth factor receptor-bound protein 2	protein binding binding insulin receptor substrate binding GTPase regulator activity enzyme regulator activity guanyl-nucleotide exchange factor adaptor activity nucleoside-triphosphatase regulator activity molecular function regulator activity protein-macromolecule adaptor activity molecular adaptor activity phosphoprotein binding phosphotyrosine residue binding protein phosphorylated amino acid binding protein phosphatase binding protein binding binding insulin receptor substrate binding GTPase regulator activity enzyme regulator activity guanyl-nucleotide exchange factor adaptor activity nucleoside-triphosphatase regulator activity molecular function regulator activity protein-macromolecule adaptor activity molecular adaptor activity phosphoprotein binding phosphotyrosine residue binding protein phosphorylated amino acid binding protein phosphatase binding phosphatase binding enzyme binding neurotrophin TRK receptor binding neurotrophin TRKA receptor binding signaling receptor binding cytokine receptor binding neurotrophin receptor binding SH3 domain binding protein domain specific binding ephrin receptor binding identical protein binding transmembrane receptor protein tyrosine kinase adaptor activity protein tyrosine kinase binding receptor tyrosine kinase binding protein kinase binding signaling adaptor activity signaling receptor complex adaptor activity kinase binding RNA binding nucleic acid binding epidermal growth factor receptor binding growth factor receptor binding	localization import into cell receptor internalization transport cellular process receptor-mediated endocytosis endocytosis establishment of localization vesicle-mediated transport cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process response to stimulus localization import into cell receptor internalization transport cellular process receptor-mediated endocytosis endocytosis establishment of localization vesicle-mediated transport cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process response to stimulus signaling biological regulation regulation of signal transduction regulation of MAPK cascade intracellular signal transduction cell communication regulation of intracellular signal transduction regulation of response to stimulus intracellular signaling cassette MAPK cascade regulation of cell communication signal transduction response to ionizing radiation cellular response to ionizing radiation response to radiation response to abiotic stimulus cellular response to radiation cellular response to abiotic stimulus cellular response to environmental stimulus cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization cell surface receptor signaling pathway insulin-like growth factor receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway enzyme-linked receptor protein signaling pathway ERBB signaling pathway epidermal growth factor receptor signaling pathway positive regulation of cell communication small GTPase-mediated signal transduction positive regulation of signal transduction regulation of small GTPase mediated signal transduction positive regulation of biological process positive regulation of response to stimulus positive regulation of cellular process Rac protein signal transduction positive regulation of intracellular signal transduction regulation of Rac protein signal transduction positive regulation of Rac protein signal transduction positive regulation of small GTPase mediated signal transduction positive regulation of signaling immune response-regulating cell surface receptor signaling pathway immune response-activating signaling pathway immune response-regulating signaling pathway positive regulation of immune response regulation of immune system process positive regulation of immune system process immune response-activating cell surface receptor signaling pathway immune response B cell receptor signaling pathway immune system process regulation of immune response antigen receptor-mediated signaling pathway activation of immune response cellular response to stress DNA damage response response to stress signal transduction in response to DNA damage developmental process multicellular organismal process cellular developmental process peripheral nervous system development cell development nervous system development glial cell development multicellular organism development neurogenesis Schwann cell development gliogenesis glial cell differentiation cell differentiation anatomical structure development animal gross anatomical part developmental process Schwann cell differentiation system development regulation of immune effector process lymphocyte mediated immunity negative regulation of biological process negative regulation of lymphocyte mediated immunity response to biotic stimulus negative regulation of natural killer cell mediated immunity leukocyte mediated immunity natural killer cell mediated immunity regulation of natural killer cell mediated immunity response to other organism regulation of innate immune response negative regulation of immune response negative regulation of immune effector process response to external stimulus leukocyte mediated cytotoxicity immune effector process regulation of leukocyte mediated immunity defense response to other organism negative regulation of response to external stimulus negative regulation of defense response natural killer cell mediated cytotoxicity regulation of cell killing negative regulation of natural killer cell mediated cytotoxicity regulation of defense response regulation of response to biotic stimulus regulation of natural killer cell mediated cytotoxicity biological process involved in interspecies interaction between organisms regulation of response to external stimulus negative regulation of response to biotic stimulus regulation of response to stress negative regulation of leukocyte mediated cytotoxicity negative regulation of cellular process innate immune response response to external biotic stimulus negative regulation of cell killing defense response negative regulation of response to stimulus regulation of leukocyte mediated cytotoxicity defense response to symbiont regulation of lymphocyte mediated immunity negative regulation of immune system process negative regulation of leukocyte mediated immunity cell killing negative regulation of innate immune response reactive oxygen species metabolic process positive regulation of reactive oxygen species metabolic process positive regulation of metabolic process metabolic process regulation of metabolic process regulation of reactive oxygen species metabolic process Ras protein signal transduction T cell activation cell activation lymphocyte activation leukocyte activation cellular response to nitrogen compound response to peptide hormone insulin receptor signaling pathway cellular response to endogenous stimulus response to hormone cellular response to hormone stimulus response to endogenous stimulus response to oxygen-containing compound cellular response to peptide hormone stimulus response to nitrogen compound cellular response to oxygen-containing compound cellular response to chemical stimulus response to chemical response to insulin cellular response to insulin stimulus myelination axon ensheathment ensheathment of neurons T cell receptor signaling pathway adaptive immune response hemopoiesis mononuclear cell differentiation lymphocyte differentiation negative T cell selection T cell differentiation T cell selection leukocyte differentiation positive T cell selection	cell-cell junction cellular anatomical structure anchoring junction cell junction cell periphery protein-containing complex Grb2-EGFR complex plasma membrane protein complex membrane plasma membrane membrane protein complex extracellular exosome membrane-bounded organelle extracellular vesicle cell-cell junction cellular anatomical structure anchoring junction cell junction cell periphery protein-containing complex Grb2-EGFR complex plasma membrane protein complex membrane plasma membrane membrane protein complex extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol intracellular organelle nucleus nuclear protein-containing complex COP9 signalosome intracellular membrane-bounded organelle vesicle membrane organelle membrane Golgi apparatus endomembrane system cell cortex membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen endosome intracellular vesicle cytoplasmic vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth A]	IPR036028	SH3-like domain superfamily	Homologous Superfamily
A [auth B], B [auth A]	IPR001452	SH3 domain	Domain
A [auth B], B [auth A]	IPR035643	GRB2, C-terminal SH3 domain	Domain
A [auth B], B [auth A]	IPR035641	GRB2, N-terminal SH3 domain	Domain
A [auth B], B [auth A]	IPR043539	Grb2-like	Family
A [auth B], B [auth A]	IPR036860	SH2 domain superfamily	Homologous Superfamily
A [auth B], B [auth A]	IPR000980	SH2 domain	Domain
A [auth B], B [auth A]	IPR039671	Protein THEMIS	Family
A [auth B], B [auth A]	IPR025946	CABIT domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth B], B [auth A]	: Q8N1K5	cancer large cell medulloblastoma ovarian cancer schizophrenia systemic sclerosis invasive ductal breast carcinoma non-alcoholic fatty liver disease psoriasis speech-language disorder-1 juvenile dermatomyositis osteosarcoma rheumatoid arthritis systemic lupus erythematosus celiac disease oligodendroglioma cancer large cell medulloblastoma ovarian cancer schizophrenia systemic sclerosis invasive ductal breast carcinoma non-alcoholic fatty liver disease psoriasis speech-language disorder-1 juvenile dermatomyositis osteosarcoma rheumatoid arthritis systemic lupus erythematosus celiac disease oligodendroglioma primitive neuroectodermal tumor Sjogren syndrome Alcoholic Intoxication, Chronic attention deficit hyperactivity disorder, inattentive type gastric cancer Hodgkins lymphoma large cell medulloblastoma malignant glioma osteosarcoma psoriasis tuberculosis allergic rhinitis atypical teratoid rhabdoid tumor Crohn disease gastric carcinoma inflammatory bowel disease lung carcinoma medulloblastoma pilocytic astrocytoma sarcoidosis astrocytic tumor B-cell chronic lymphocytic leukemia epilepsy, idiopathic generalized glioblastoma interstitial cystitis malignant ependymoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.