Annotations: 9UO6

Cryo-EM structure of the Xenopus IgX-Fc hexamer

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	Fusion_gly	e9uo6L1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
K	Fusion_gly	e9uo6K1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
J	Fusion_gly	e9uo6J1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
I	Fusion_gly	e9uo6I1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
H	Fusion_gly	e9uo6H1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
G	Fusion_gly	e9uo6G1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
F	Fusion_gly	e9uo6F1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
E	Fusion_gly	e9uo6E1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
D	Fusion_gly	e9uo6D1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
C [auth A]	SIR2_2	e9uo6A1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: SIR2_2	ECOD (v295.2)
B	Fusion_gly	e9uo6B1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)
A [auth C]	Fusion_gly	e9uo6C1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Fusion_gly	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C], B, C [auth A], D, E, A [auth C], B, C [auth A], D, E, F, G, H, I, J, K, L	PF07654	Immunoglobulin C1-set domain (C1-set)	Immunoglobulin C1-set domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C], B, C [auth A], D, E, A [auth C], B, C [auth A], D, E, F, G, H, I, J, K, L	Uncharacterized LOC101027262 precursor	protein binding binding signaling receptor binding immunoglobulin receptor binding antigen binding	adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity humoral immune response response to stimulus positive regulation of biological process positive regulation of response to stimulus complement activation humoral immune response mediated by circulating immunoglobulin positive regulation of immune response leukocyte mediated immunity regulation of immune system process positive regulation of immune system process complement activation, classical pathway regulation of biological process adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity humoral immune response response to stimulus positive regulation of biological process positive regulation of response to stimulus complement activation humoral immune response mediated by circulating immunoglobulin positive regulation of immune response leukocyte mediated immunity regulation of immune system process positive regulation of immune system process complement activation, classical pathway regulation of biological process immune response biological regulation immunoglobulin mediated immune response adaptive immune response immune effector process regulation of response to stimulus immune system process B cell mediated immunity regulation of immune response activation of immune response biological process involved in interspecies interaction between organisms response to other organism defense response antibacterial humoral response defense response to symbiont response to external stimulus antimicrobial humoral response response to biotic stimulus defense response to bacterium defense response to other organism response to stress response to bacterium response to external biotic stimulus	protein-containing complex cellular anatomical structure extracellular region extracellular protein-containing complex immunoglobulin complex, circulating immunoglobulin complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C], B, C [auth A], D, E, A [auth C], B, C [auth A], D, E, F, G, H, I, J, K, L	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
A [auth C], B, C [auth A], D, E, A [auth C], B, C [auth A], D, E, F, G, H, I, J, K, L	IPR050380	Immune Recognition and Response Modulators	Family
A [auth C], B, C [auth A], D, E, A [auth C], B, C [auth A], D, E, F, G, H, I, J, K, L	IPR003597	Immunoglobulin C1-set	Domain
A [auth C], B, C [auth A], D, E, A [auth C], B, C [auth A], D, E, F, G, H, I, J, K, L	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A [auth C], B, C [auth A], D, E, A [auth C], B, C [auth A], D, E, F, G, H, I, J, K, L	IPR013106	Immunoglobulin V-set domain	Domain
A [auth C], B, C [auth A], D, E, A [auth C], B, C [auth A], D, E, F, G, H, I, J, K, L	IPR003599	Immunoglobulin domain subtype	Domain
A [auth C], B, C [auth A], D, E, A [auth C], B, C [auth A], D, E, F, G, H, I, J, K, L	IPR007110	Immunoglobulin-like domain	Domain
A [auth C], B, C [auth A], D, E, A [auth C], B, C [auth A], D, E, F, G, H, I, J, K, L	IPR003006	Immunoglobulin/major histocompatibility complex, conserved site	Conserved Site