9UE9 | pdb_00009ue9

Heptameric pore structure of Vibrio cholerae Cytolysin (VCC) embedded in lipid bilayer

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Ricin B-like lectins	8091099	3000678	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Leukocidin-like	8091101	3000256	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Mannose-binding lectins	8091096	3001715	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Mannose-binding lectins	8091096	3001715	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ricin B-like lectins	8091099	3000678	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Leukocidin-like	8091101	3000256	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Mannose-binding lectins	8091096	3001715	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ricin B-like lectins	8091099	3000678	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Leukocidin-like	8091101	3000256	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ricin B-like lectins	8091099	3000678	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Leukocidin-like	8091101	3000256	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Mannose-binding lectins	8091096	3001715	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Leukocidin-like	8091101	3000256	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Ricin B-like lectins	8091099	3000678	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Mannose-binding lectins	8091096	3001715	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Mannose-binding lectins	8091096	3001715	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Leukocidin-like	8091101	3000256	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Ricin B-like lectins	8091099	3000678	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Mannose-binding lectins	8091096	3001715	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Leukocidin-like	8091101	3000256	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Ricin B-like lectins	8091099	3000678	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G	PF07968	Leukocidin/Hemolysin toxin family (Leukocidin)	Leukocidin/Hemolysin toxin family		Domain
A, B, C, D, E A, B, C, D, E, F, G	PF16458	Beta-prism lectin (Beta-prism_lec)	Beta-prism lectin	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G	HlyA	binding carbohydrate binding toxin activity identical protein binding protein binding	biological process involved in interspecies interaction between organisms cytolysis in another organism cellular process disruption of cell in another organism disruption of anatomical structure in another organism cytolysis killing of cells of another organism cell killing	cellular anatomical structure membrane extracellular region host cell plasma membrane host cellular component host cell part host cell membrane other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G	IPR043080	Hemolytic toxin, N-terminal domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G	IPR016183	Leukocidin/Hemolysin toxin	Domain
A, B, C, D, E A, B, C, D, E, F, G	IPR036435	Leukocidin/porin MspA superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G	IPR022220	Hemolytic toxin, N-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G	IPR044883	Hemolysin, pre-stem domain	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G	IPR036404	Jacalin-like lectin domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G	IPR032496	Hemolysin, beta-prism lectin	Domain
A, B, C, D, E A, B, C, D, E, F, G	IPR035992	Ricin B-like lectins	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G	IPR000772	Ricin B, lectin domain	Domain