The atomic coordinates of the mouse CatSper trimer
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| PA [auth Q] | Fusion_gly | e9ubxQ1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| JA [auth i] | Fusion_gly | e9ubxi1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| I | Fusion_gly | e9ubxI1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| R [auth q] | Fusion_gly | e9ubxq1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| EA [auth d] | Fusion_gly | e9ubxd1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| D | Fusion_gly | e9ubxD1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| Q [auth p] | Fusion_gly | e9ubxp1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| DA [auth c] | Fusion_gly | e9ubxc1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| C | Fusion_gly | e9ubxC1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| P [auth o] | Fusion_gly | e9ubxo1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| CA [auth b] | Fusion_gly | e9ubxb1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| B | Fusion_gly | e9ubxB1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| Y [auth y] | Fusion_gly | e9ubxy1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| MA [auth l] | Fusion_gly | e9ubxl1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| L | Fusion_gly | e9ubxL1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| O [auth n] | Fusion_gly | e9ubxn1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| BA [auth a] | Fusion_gly | e9ubxa1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
| A | Fusion_gly | e9ubxA1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Fusion_gly | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I, JA [auth i], PA [auth Q] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
| H, IA [auth h], V [auth u] | PF22850 | CATSPERD/E C-terminal domain (CATSPERD-E_C) | CATSPERD/E C-terminal domain | The CATSPER (cation channel of sperm) complex is a tetrameric complex consisting of CATSPER1, CATSPER2, CATSPER3 and CATSPER4, it functions as an alkalinisation-activated calcium channel. This complex is involved in sperm cell hyperactivation, a proc ... | Domain |
| H, IA [auth h], V [auth u] | PF22841 | CATSPERE first N-terminal domain (CATSPERE_NTD1) | CATSPERE first N-terminal domain | This entry includes CATSPERE, the auxiliary subunit epsilon of the CatSper complex, a complex involved in sperm cell hyperactivation. This process is needed for sperm motility, which is essential late in the preparation of sperm for fertilisation [1, ... | Domain |
| H, IA [auth h], V [auth u] | PF22849 | CATSPERE Ig-like domain (CATSPERE_Ig-like) | CATSPERE Ig-like domain | The CATSPER (cation channel of sperm) complex is a tetrameric complex consisting of CATSPER1, CATSPER2, CATSPER3 and CATSPER4, it functions as an alkalinisation-activated calcium channel. This complex is involved in sperm cell hyperactivation, a proc ... | Domain |
| H, IA [auth h], V [auth u] | PF22843 | CATSPERE second N-terminal domain (CATSPERE_NTD2) | CATSPERE second N-terminal domain | This entry includes CATSPERE, the auxiliary subunit epsilon of the CatSper complex, a complex involved in sperm cell hyperactivation. This process is needed for sperm motility, which is essential late in the preparation of sperm for fertilisation [1, ... | Domain |
| H, IA [auth h], V [auth u] | PF22844 | CATSPERE beta-propeller domain (Beta-prop_CATSPERE) | CATSPERE beta-propeller domain | - | Repeat |
| G, HA [auth g], U [auth t] | PF22850 | CATSPERD/E C-terminal domain (CATSPERD-E_C) | CATSPERD/E C-terminal domain | The CATSPER (cation channel of sperm) complex is a tetrameric complex consisting of CATSPER1, CATSPER2, CATSPER3 and CATSPER4, it functions as an alkalinisation-activated calcium channel. This complex is involved in sperm cell hyperactivation, a proc ... | Domain |
| G, HA [auth g], U [auth t] | PF15020 | CATSPERD, beta-propeller domain (Beta-prop_CATSPERD) | CATSPERD, beta-propeller domain | - | Repeat |
| G, HA [auth g], U [auth t] | PF23747 | CATSPERD Ig-like domain (Ig-like_CATSPERD) | CATSPERD Ig-like domain | The CATSPER (cation channel of sperm) complex is a tetrameric complex consisting of CATSPER1, CATSPER2, CATSPER3 and CATSPER4, it functions as an alkalinisation-activated calcium channel. This complex is involved in sperm cell hyperactivation, a proc ... | Domain |
| F, GA [auth s], T [auth f] | PF22851 | CATSPERG Ig-like domain (CATSPERG_Ig-like) | CATSPERG Ig-like domain | The CATSPER (cation channel of sperm) complex is a tetrameric complex consisting of CATSPER1, CATSPER2, CATSPER3 and CATSPER4, it functions as an alkalinisation-activated calcium channel. This complex is involved in sperm cell hyperactivation, a proc ... | Domain |
| F, GA [auth s], T [auth f] | PF22840 | CATSPERG N-terminal domain (CATSPERG_NTD) | CATSPERG N-terminal domain | This entry includes CATSPERG, an auxiliary subunit of the CatSper complex, a complex involved in sperm cell hyperactivation. This process is needed for sperm motility, which is essential late in the preparation of sperm for fertilisation [1,2]. This ... | Domain |
| F, GA [auth s], T [auth f] | PF15064 | CATSPERG beta-propeller domain (CATSPERG_beta-prop) | CATSPERG beta-propeller domain | - | Repeat |
| F, GA [auth s], T [auth f] | PF22846 | CATSPERG C-terminal domain (CATSPERG_C) | CATSPERG C-terminal domain | The CATSPER (cation channel of sperm) complex is a tetrameric complex consisting of CATSPER1, CATSPER2, CATSPER3 and CATSPER4, it functions as an alkalinisation-activated calcium channel. This complex is involved in sperm cell hyperactivation, a proc ... | Domain |
| E, FA [auth e], S [auth r] | PF21541 | CATSPER protein subunit beta protein 1st domain (CATSPERB_1st) | CATSPER protein subunit beta protein 1st domain | This entry represents the N-terminal domain from the Cation channel sperm-associated protein subunit beta protein. | Domain |
| E, FA [auth e], S [auth r] | PF22830 | CATSPERB head domain (CATSPERB_head) | CATSPERB head domain | CATSPERB (Cation channel sperm-associated protein subunit beta) is an auxiliary subunit of the CatSper complex which is involved in sperm cell hyperactivation, a process needed for sperm motility which is essential late in the preparation of sperm fo ... | Domain |
| E, FA [auth e], S [auth r] | PF21548 | CATSPER subunit beta protein 2nd domain (CATSPERB_2nd) | CATSPER subunit beta protein 2nd domain | - | Repeat |
| E, FA [auth e], S [auth r] | PF22831 | CATSPERB Ig-like domain (CATSPERB_Ig-like) | CATSPERB Ig-like domain | CATSPERB (Cation channel sperm-associated protein subunit beta) is an auxiliary subunit of the CatSper complex which is involved in sperm cell hyperactivation, a process needed for sperm motility which is essential late in the preparation of sperm fo ... | Domain |
| E, FA [auth e], S [auth r] | PF15149 | CATSPERB, C-terminal domain (CATSPERB_C) | CATSPERB, C-terminal domain | This entry includes CATSPERB, an auxiliary subunit of the CatSper complex, a complex involved in sperm cell hyperactivation. This process is needed for sperm motility, which is essential late in the preparation of sperm for fertilisation [1,2]. This ... | Domain |
| D, EA [auth d], R [auth q] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
| C, DA [auth c], Q [auth p] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
| B, CA [auth b], P [auth o] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
| L, MA [auth l], Y [auth y] | PF03137 | Organic Anion Transporter Polypeptide (OATP) family (OATP) | Organic Anion Transporter Polypeptide (OATP) family | - | Family |
| L, MA [auth l], Y [auth y] | PF07648 | Kazal-type serine protease inhibitor domain (Kazal_2) | Kazal-type serine protease inhibitor domain | Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containi ... | Domain |
| J, KA [auth j], W [auth w] | PF15158 | Cation channel sperm-associated auxiliary subunit TMEM249 (TMEM249) | Cation channel sperm-associated auxiliary subunit TMEM249 | - | Family |
| A, BA [auth a], O [auth n] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |














