9U5U | pdb_00009u5u

The 1:1 cryo-EM structure of BAP1/ASXL1-K351Ub in complex with H2AK119Ub nucleosome


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, E
Histone H3.2
B, F
Histone H4
C, G
Histone H2A type 1-B/E
D, H
Histone H2B type 1-K
DNA (147-MER)---
K [auth L]Ubiquitin carboxyl-terminal hydrolase BAP1
L [auth M],
N [auth O]
Ubiquitin
M [auth N]Polycomb group protein ASXL1
DNA (147-MER)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, E
IPR009072Histone-foldHomologous Superfamily
A, E
IPR007125Core Histone H2A/H2B/H3 domainDomain
A, E
IPR000164Histone H3/CENP-AFamily
B, F
IPR009072Histone-foldHomologous Superfamily
B, F
IPR035425CENP-T/Histone H4, histone foldDomain
B, F
IPR001951Histone H4Family
B, F
IPR019809Histone H4, conserved siteConserved Site
B, F
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
C, G
IPR009072Histone-foldHomologous Superfamily
C, G
IPR002119Histone H2AFamily
C, G
IPR007125Core Histone H2A/H2B/H3 domainDomain
C, G
IPR032454Histone H2A, C-terminal domainDomain
C, G
IPR032458Histone H2A conserved siteConserved Site
D, H
IPR009072Histone-foldHomologous Superfamily
D, H
IPR000558Histone H2BFamily
D, H
IPR007125Core Histone H2A/H2B/H3 domainDomain
D, H
IPR055333Histone H2B, conserved siteConserved Site
K [auth L]IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
K [auth L]IPR001578Peptidase C12, ubiquitin carboxyl-terminal hydrolaseDomain
K [auth L]IPR041507Peptidase C12, C-terminal domainDomain
K [auth L]IPR036959Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyHomologous Superfamily
L [auth M],
N [auth O]
IPR019954Ubiquitin conserved siteConserved Site
L [auth M],
N [auth O]
IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
L [auth M],
N [auth O]
IPR050158Ubiquitin and ubiquitin-likeFamily
L [auth M],
N [auth O]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
L [auth M],
N [auth O]
IPR000626Ubiquitin-like domainDomain
L [auth M],
N [auth O]
IPR002906Small ribosomal subunit protein eS31Domain
L [auth M],
N [auth O]
IPR019956Ubiquitin domainDomain
L [auth M],
N [auth O]
IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
M [auth N]IPR026905Protein ASX-like, PHD domainDomain
M [auth N]IPR024811Polycomb protein ASX/ASX-likeFamily
M [auth N]IPR028020ASX, DEUBAD domainDomain
M [auth N]IPR007759ASXL, HARE-HTH domainDomain
M [auth N]IPR044867DEUBAD domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, E
PharosQ71DI3
B, F
PharosP62805
C, G
PharosP04908
D, H
PharosO60814
K [auth L]PharosQ92560
L [auth M],
N [auth O]
PharosP62979
M [auth N]PharosQ8IXJ9