9TPD | pdb_00009tpd

Crystal structure of integrin-linked kinase (ILK) in complex with alpha-parvin and a cyano-quinoline ligand

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Alpha-parvin	enzyme regulator activity protein kinase inhibitor activity molecular function inhibitor activity molecular function regulator activity enzyme inhibitor activity protein kinase regulator activity kinase inhibitor activity kinase regulator activity cytoskeletal protein binding actin binding protein binding binding cell adhesion molecule binding cadherin binding	developmental process heart development multicellular organismal process cardiac chamber morphogenesis heart morphogenesis animal organ development circulatory system development multicellular organism development anatomical structure morphogenesis cardiac septum development cardiac septum morphogenesis anatomical structure development cardiac chamber development outflow tract septum morphogenesis outflow tract morphogenesis developmental process heart development multicellular organismal process cardiac chamber morphogenesis heart morphogenesis animal organ development circulatory system development multicellular organism development anatomical structure morphogenesis cardiac septum development cardiac septum morphogenesis anatomical structure development cardiac chamber development outflow tract septum morphogenesis outflow tract morphogenesis animal organ morphogenesis system development cell chemotaxis cellular response to stimulus chemotaxis response to stimulus response to external stimulus smooth muscle cell migration muscle cell migration cellular response to chemical stimulus taxis response to chemical smooth muscle cell chemotaxis cell migration cellular process cell motility locomotion regulation of protein stability biological regulation regulation of biological quality protein stabilization establishment or maintenance of cell polarity cell adhesion substrate adhesion-dependent cell spreading cell-substrate adhesion heterotypic cell-cell adhesion cell-cell adhesion cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization blood vessel morphogenesis tube development angiogenesis sprouting angiogenesis vasculature development tube morphogenesis anatomical structure formation involved in morphogenesis blood vessel development regulation of biological process regulation of developmental process establishment or maintenance of cell polarity regulating cell shape regulation of cell shape cell morphogenesis regulation of cell morphogenesis regulation of anatomical structure morphogenesis actin-mediated cell contraction actin filament-based movement organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component assembly cilium assembly cilium organization cell projection assembly	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction intracellular anatomical structure intracellular membraneless organelle Z disc sarcomere intracellular organelle I band organelle membraneless organelle contractile muscle fiber cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction intracellular anatomical structure intracellular membraneless organelle Z disc sarcomere intracellular organelle I band organelle membraneless organelle contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer supramolecular complex cytoskeleton actin cytoskeleton cytosol cell periphery plasma membrane membrane
A	Scaffold protein ILK	protein-macromolecule adaptor activity molecular adaptor activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding protein-macromolecule adaptor activity molecular adaptor activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein binding signaling receptor binding cation binding magnesium ion binding metal ion binding cell adhesion molecule binding protein-containing complex binding integrin binding kinase binding enzyme binding protein kinase binding	developmental process multicellular organismal process cellular developmental process peripheral nervous system axon ensheathment peripheral nervous system development cell development nervous system development glial cell development myelination multicellular organism development neurogenesis Schwann cell development gliogenesis axon ensheathment ensheathment of neurons developmental process multicellular organismal process cellular developmental process peripheral nervous system axon ensheathment peripheral nervous system development cell development nervous system development glial cell development myelination multicellular organism development neurogenesis Schwann cell development gliogenesis axon ensheathment ensheathment of neurons glial cell differentiation cell differentiation anatomical structure development myelination in peripheral nervous system cellular process Schwann cell differentiation system development cell adhesion substrate adhesion-dependent cell spreading cell-substrate adhesion membrane organization membrane biogenesis membrane assembly plasma membrane raft organization cellular component organization cellular component biogenesis plasma membrane raft assembly caveola assembly cellular component assembly plasma membrane organization cellular component organization or biogenesis membrane raft organization membrane raft assembly endomembrane system organization regulation of body fluid levels wound healing response to stimulus homotypic cell-cell adhesion cell activation hemostasis biological regulation platelet aggregation blood coagulation cell-cell adhesion response to stress coagulation regulation of biological quality response to wounding platelet activation ameboidal-type cell migration cell migration fibroblast migration cell motility positive regulation of substrate adhesion-dependent cell spreading regulation of biological process regulation of cellular process regulation of cell-substrate adhesion positive regulation of cell adhesion regulation of substrate adhesion-dependent cell spreading regulation of cell adhesion positive regulation of biological process positive regulation of cell-substrate adhesion positive regulation of cellular process localization protein localization to cell periphery macromolecule localization intracellular protein localization protein localization to cell cortex anatomical structure morphogenesis cell morphogenesis cellular response to stimulus cell surface receptor signaling pathway signaling response to cytokine cytokine-mediated signaling pathway cell communication response to peptide cellular response to tumor necrosis factor response to chemical tumor necrosis factor-mediated signaling pathway cellular response to cytokine stimulus signal transduction response to tumor necrosis factor nerve development mesonephric epithelium development kidney epithelium development nephron morphogenesis branching morphogenesis of an epithelial tube nephron tubule morphogenesis nephron epithelium morphogenesis nephron tubule development renal system development ureteric bud morphogenesis tube morphogenesis branching involved in ureteric bud morphogenesis renal tubule development animal organ morphogenesis epithelial tube morphogenesis nephron development nephron epithelium development ureteric bud development epithelium development tube development mesonephros development animal organ development morphogenesis of an epithelium tissue development tissue morphogenesis kidney morphogenesis morphogenesis of a branching structure mesonephric tubule morphogenesis kidney development mesonephric tubule development renal tubule morphogenesis morphogenesis of a branching epithelium cell-matrix adhesion positive regulation of cell communication positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction regulation of signal transduction intracellular signal transduction positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette regulation of signaling positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of response to stimulus regulation of cell communication regulation of canonical NF-kappaB signal transduction positive regulation of signaling phosphatidylinositol 3-kinase/protein kinase B signal transduction integrin-mediated signaling pathway cell surface receptor protein serine/threonine kinase signaling pathway cellular response to growth factor stimulus regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of BMP signaling pathway cellular response to endogenous stimulus BMP signaling pathway enzyme-linked receptor protein signaling pathway cellular response to BMP stimulus regulation of BMP signaling pathway response to endogenous stimulus regulation of cellular response to growth factor stimulus positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway response to BMP transforming growth factor beta receptor superfamily signaling pathway response to growth factor cell population proliferation positive regulation of cell population proliferation regulation of cell population proliferation neural precursor cell proliferation regulation of osteoblast differentiation regulation of developmental process regulation of cell differentiation osteoblast differentiation positive regulation of developmental process positive regulation of osteoblast differentiation ossification positive regulation of cell differentiation positive regulation of DNA-templated transcription RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression biosynthetic process positive regulation of RNA biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process microtubule cytoskeleton organization mitotic cell cycle mitotic spindle organization organelle organization mitotic cell cycle process microtubule-based process cell cycle cytoskeleton organization microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway positive regulation of Wnt signaling pathway Wnt signaling pathway positive regulation of canonical Wnt signaling pathway regulation of Wnt signaling pathway negative regulation of cell population proliferation negative regulation of neural precursor cell proliferation negative regulation of biological process negative regulation of cellular process regulation of neural precursor cell proliferation cell projection organization establishment or maintenance of bipolar cell polarity establishment or maintenance of epithelial cell apical/basal polarity establishment or maintenance of apical/basal cell polarity establishment or maintenance of cell polarity heart development heart morphogenesis circulatory system development outflow tract morphogenesis	cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium membrane intracellular organelle intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle actin cytoskeleton cytoplasm cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium membrane intracellular organelle intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle actin cytoskeleton cytoplasm cytosol chromatin chromosome sarcomere contractile muscle fiber supramolecular fiber myofibril supramolecular polymer supramolecular complex anchoring junction cell junction focal adhesion cell-substrate junction cell periphery cell cortex centrosome microtubule organizing center microtubule cytoskeleton plasma membrane membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR028433	Parvin	Family
B	IPR036872	CH domain superfamily	Homologous Superfamily
B	IPR001715	Calponin homology domain	Domain
A	IPR035692	Integrin-linked protein kinase, pseudokinase domain	Domain
A	IPR000719	Protein kinase domain	Domain
A	IPR002110	Ankyrin repeat	Repeat
A	IPR036770	Ankyrin repeat-containing domain superfamily	Homologous Superfamily
A	IPR051681	Serine/Threonine Kinases and Pseudokinases	Family
A	IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	Domain
A	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	: Q9NVD7	substance abuse Substance Use Disorders adrenal cortex carcinoma atypical teratoid rhabdoid tumor diabetes mellitus lung cancer substance-related disorder astrocytic tumor breast cancer malignant colon neoplasm ovarian cancer sinusitis substance dependence attention deficit hyperactivity disorder, inattentive type cutaneous lupus erythematosus substance abuse Substance Use Disorders adrenal cortex carcinoma atypical teratoid rhabdoid tumor diabetes mellitus lung cancer substance-related disorder astrocytic tumor breast cancer malignant colon neoplasm ovarian cancer sinusitis substance dependence attention deficit hyperactivity disorder, inattentive type cutaneous lupus erythematosus drug dependence invasive ductal breast carcinoma malignant mesothelioma polycystic ovary syndrome
A	: Q13418	thoracic disease cocaine abuse Liver Cirrhosis, Experimental cocaine dependence epilepsy malignant mesothelioma transient ischemic attack polyp of colon dilated cardiomyopathy ovarian cancer rheumatoid arthritis osteosarcoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.