9TJX | pdb_00009tjx

Structure of factor VII Gla domain bound to EPCR

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Endothelial protein C receptor	molecular transducer activity signaling receptor activity	multicellular organismal process regulation of body fluid levels wound healing response to stimulus hemostasis biological regulation blood coagulation response to stress coagulation regulation of biological quality response to wounding regulation of biological process negative regulation of coagulation negative regulation of biological process multicellular organismal process regulation of body fluid levels wound healing response to stimulus hemostasis biological regulation blood coagulation response to stress coagulation regulation of biological quality response to wounding regulation of biological process negative regulation of coagulation negative regulation of biological process regulation of multicellular organismal process negative regulation of multicellular organismal process regulation of coagulation	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle extracellular space vesicle extracellular membrane-bounded organelle cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular organelle centrosome microtubule organizing center intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle microtubule cytoskeleton cell surface perinuclear region of cytoplasm cytoplasm cell periphery plasma membrane membrane
E [auth L], F [auth E], G [auth F], H [auth R]	Factor VII light chain	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity cation binding ion binding binding calcium ion binding metal ion binding small molecule binding peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity cation binding ion binding binding calcium ion binding metal ion binding small molecule binding protein binding signaling receptor binding	multicellular organismal process regulation of body fluid levels wound healing response to stimulus hemostasis biological regulation blood coagulation response to stress coagulation regulation of biological quality response to wounding response to lipid response to chemical response to astaxanthin multicellular organismal process regulation of body fluid levels wound healing response to stimulus hemostasis biological regulation blood coagulation response to stress coagulation regulation of biological quality response to wounding response to lipid response to chemical response to astaxanthin cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication cellular process positive regulation of signaling response to sterol response to alcohol response to oxygen-containing compound response to cholesterol response to thyrotropin-releasing hormone response to hormone response to endogenous stimulus response to peptide hormone response to nitrogen compound response to carbon dioxide response to thyroid hormone response to thyroxine response to amino acid response to L-phenylalanine derivative response to acid chemical response to growth hormone response to decreased oxygen levels response to hypoxia response to oxygen levels response to abiotic stimulus positive regulation of coagulation regulation of response to external stimulus positive regulation of blood coagulation regulation of response to wounding regulation of coagulation regulation of response to stress regulation of multicellular organismal process positive regulation of hemostasis regulation of hemostasis positive regulation of response to wounding regulation of blood coagulation response to external stimulus positive regulation of wound healing regulation of wound healing positive regulation of multicellular organismal process positive regulation of locomotion regulation of cell motility positive regulation of chemotaxis positive regulation of cell migration positive regulation of response to external stimulus taxis positive regulation of cell motility regulation of cell migration cell migration regulation of immune system process cell motility positive regulation of immune system process locomotion cell chemotaxis chemotaxis regulation of leukocyte chemotaxis regulation of leukocyte migration positive regulation of leukocyte chemotaxis positive regulation of leukocyte migration regulation of chemotaxis leukocyte migration cellular response to chemical stimulus immune system process regulation of locomotion leukocyte chemotaxis regulation of platelet-derived growth factor receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway enzyme-linked receptor protein signaling pathway positive regulation of platelet-derived growth factor receptor signaling pathway cell surface receptor signaling pathway platelet-derived growth factor receptor signaling pathway rhythmic process circadian rhythm response to estrogen primary metabolic process gene expression macromolecule biosynthetic process protein maturation biosynthetic process proteolysis protein processing metabolic process protein metabolic process macromolecule metabolic process response to Thyroid stimulating hormone response to glycoprotein response to 2,3,7,8-tetrachlorodibenzodioxine positive chemotaxis positive regulation of positive chemotaxis regulation of positive chemotaxis response to phenylpropanoid response to ketone response to hydroxyisoflavone response to genistein developmental process animal organ regeneration anatomical structure development animal organ development regeneration response to nutrient levels response to nutrient response to vitamin K response to vitamin response to estradiol	membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle cellular anatomical structure organelle lumen organelle endoplasmic reticulum cytoplasm extracellular region membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle cellular anatomical structure organelle lumen organelle endoplasmic reticulum cytoplasm extracellular region extracellular space vesicle cell periphery plasma membrane membrane extracellular matrix external encapsulating structure Golgi apparatus Golgi lumen protein-containing complex catalytic complex peptidase complex serine-type peptidase complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR037055	MHC class I-like antigen recognition-like superfamily	Homologous Superfamily
A, B, C, D	IPR015669	Endothelial protein C receptor	Family
A, B, C, D	IPR011161	MHC class I-like antigen recognition-like	Domain
A, B, C, D	IPR011162	MHC classes I/II-like antigen recognition protein	Homologous Superfamily
E [auth L], F [auth E], G [auth F], H [auth R]	IPR018097	EGF-like calcium-binding, conserved site	Conserved Site
E [auth L], F [auth E], G [auth F], H [auth R]	IPR018114	Serine proteases, trypsin family, histidine active site	Active Site
E [auth L], F [auth E], G [auth F], H [auth R]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
E [auth L], F [auth E], G [auth F], H [auth R]	IPR033116	Serine proteases, trypsin family, serine active site	Active Site
E [auth L], F [auth E], G [auth F], H [auth R]	IPR001254	Serine proteases, trypsin domain	Domain
E [auth L], F [auth E], G [auth F], H [auth R]	IPR035972	Gamma-carboxyglutamic acid-rich (GLA) domain superfamily	Homologous Superfamily
E [auth L], F [auth E], G [auth F], H [auth R]	IPR001881	EGF-like calcium-binding domain	Domain
E [auth L], F [auth E], G [auth F], H [auth R]	IPR012224	Peptidase S1A, coagulation factor VII/IX/X/C/Z	Family
E [auth L], F [auth E], G [auth F], H [auth R]	IPR000294	Gamma-carboxyglutamic acid-rich (GLA) domain	Domain
E [auth L], F [auth E], G [auth F], H [auth R]	IPR000742	EGF-like domain	Domain
E [auth L], F [auth E], G [auth F], H [auth R]	IPR043504	Peptidase_S1_PA_chymotrypsin	Unknown
E [auth L], F [auth E], G [auth F], H [auth R]	IPR050442	Peptidase S1 family, coagulation factors	Family
E [auth L], F [auth E], G [auth F], H [auth R]	IPR017857	Coagulation factor-like, Gla domain superfamily	Homologous Superfamily
E [auth L], F [auth E], G [auth F], H [auth R]	IPR001314	Peptidase S1A, chymotrypsin family	Family
E [auth L], F [auth E], G [auth F], H [auth R]	IPR000152	EGF-type aspartate/asparagine hydroxylation site	PTM

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D	Pharos: Q9UNN8	coronary artery disease ulcerative colitis Liver Cirrhosis, Experimental astrocytic tumor gastric carcinoma invasive ductal breast carcinoma melanoma pancreatic intraductal papillary-mucinous neoplasm atypical teratoid rhabdoid tumor cystic fibrosis heart disease oligodendroglioma skin basal cell carcinoma vascular disease ductal breast carcinoma in situ coronary artery disease ulcerative colitis Liver Cirrhosis, Experimental astrocytic tumor gastric carcinoma invasive ductal breast carcinoma melanoma pancreatic intraductal papillary-mucinous neoplasm atypical teratoid rhabdoid tumor cystic fibrosis heart disease oligodendroglioma skin basal cell carcinoma vascular disease ductal breast carcinoma in situ malignant mesothelioma ovarian cancer thrombotic disease
E [auth L], F [auth E], G [auth F], H [auth R]	Pharos: P08709	congenital factor VII deficiency Venous Thrombosis disseminated intravascular coagulation factor VII deficiency myocardial infarction hemorrhagic disease malignant mesothelioma pancreatic ductal adenocarcinoma atrial fibrillation intracranial hemorrhage large cell medulloblastoma medulloblastoma thrombophilia atypical teratoid rhabdoid tumor glioblastoma congenital factor VII deficiency Venous Thrombosis disseminated intravascular coagulation factor VII deficiency myocardial infarction hemorrhagic disease malignant mesothelioma pancreatic ductal adenocarcinoma atrial fibrillation intracranial hemorrhage large cell medulloblastoma medulloblastoma thrombophilia atypical teratoid rhabdoid tumor glioblastoma intracerebral hemorrhage malignant glioma thrombotic disease congenital factor XI deficiency

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
E [auth L], F [auth E], G [auth F], H [auth R]	CGU	Parent Component: GLU RESID: AA0032 PSI-MOD : L-gamma-carboxyglutamic acid MOD:00041

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.