9T9V | pdb_00009t9v

Structure of bacteriophage NO16


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF25513Viral coat protein P2 C-terminal domain (P2_C)Viral coat protein P2 C-terminal domainP2 (30.2 kDa) is the major outer-coat protein of the marine lipid-containing bacteriophage PM2. Each sub-unit of P2 is composed of two beta barrel jelly rolls, disposed normal to the surface of the capsid, which lend pseudo-6-fold symmetry to the mol ...P2 (30.2 kDa) is the major outer-coat protein of the marine lipid-containing bacteriophage PM2. Each sub-unit of P2 is composed of two beta barrel jelly rolls, disposed normal to the surface of the capsid, which lend pseudo-6-fold symmetry to the molecules, facilitating their close packing within the capsid. There is a Ca2+ ion located between the two beta barrels of P2 that helps PM2 molecular organisation stabilization. This entry represents the C-terminal jelly roll domain of P2 [1].
Domain
A, B, C, D, E
PF18628Viral coat protein P2 N-terminal domain (P2_N)Viral coat protein P2 N-terminal domainP2 (30.2 kDa) is the major outer-coat protein of the marine lipid-containing bacteriophage PM2. Each sub-unit of P2 is composed of two beta barrel jelly rolls, disposed normal to the surface of the capsid, which lend pseudo-6-fold symmetry to the mol ...P2 (30.2 kDa) is the major outer-coat protein of the marine lipid-containing bacteriophage PM2. Each sub-unit of P2 is composed of two beta barrel jelly rolls, disposed normal to the surface of the capsid, which lend pseudo-6-fold symmetry to the molecules, facilitating their close packing within the capsid. There is a Ca2+ ion located between the two beta barrels of P2 that helps PM2 molecular organisation stabilization. This entry represents the N-terminal jelly roll domain of P2 [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR053751Viral Major Capsid AssemblyHomologous Superfamily
A, B, C, D, E
IPR041377Viral coat protein P2, N-terminal domainDomain
A, B, C, D, E
IPR057915Viral coat protein P2, C-terminal domainDomain