9T93 | pdb_00009t93

cryo-EM structure of autophosphorylated mTOR complex 2, focused on a single protomer


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth G]PF05422Stress-activated map kinase interacting protein 1 (SIN1) (SIN1)Stress-activated map kinase interacting protein 1 (SIN1)- Family
D [auth G]PF16978SAPK-interacting protein 1 (Sin1), middle CRIM domain (CRIM)SAPK-interacting protein 1 (Sin1), middle CRIM domain- Family
C [auth E]PF14663Rapamycin-insensitive companion of mTOR RasGEF_N domain (RasGEF_N_2)Rapamycin-insensitive companion of mTOR RasGEF_N domainRictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important f ...Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the more conserved central section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.
Domain
C [auth E]PF14664Rapamycin-insensitive companion of mTOR, N-term (RICTOR_N)Rapamycin-insensitive companion of mTOR, N-termRictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important f ...Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the N-terminal conserved section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.
Domain
C [auth E]PF14666Rapamycin-insensitive companion of mTOR, middle domain (RICTOR_M)Rapamycin-insensitive companion of mTOR, middle domainRictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important f ...Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the more conserved central section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.
Domain
C [auth E]PF14668Rapamycin-insensitive companion of mTOR, domain 5 (RICTOR_V)Rapamycin-insensitive companion of mTOR, domain 5Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important f ...Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. These long eukaryotic proteins carry several well-conserved domains, and this is No.5.
Domain
B [auth C]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF02260FATC domain (FATC)FATC domain- Family
PF23593Serine/threonine-protein kinase ATR-like, HEAT repeats (HEAT_ATR)Serine/threonine-protein kinase ATR-like, HEAT repeats- Repeat
PF08771FKBP12-rapamycin binding domain (FRB_dom)FKBP12-rapamycin binding domainThe macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapa ...The macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapamycin binding domain (FRB) of the TOR proteins. This entry represents the FRB domain [1, 2].
Domain
PF00454Phosphatidylinositol 3- and 4-kinase (PI3_PI4_kinase)Phosphatidylinositol 3- and 4-kinase- Family
PF11865Serine/threonine-protein kinase mTOR domain (mTOR_dom)Serine/threonine-protein kinase mTOR domain- Repeat
PF02259FAT domain (FAT)FAT domain- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth G]Target of rapamycin complex 2 subunit MAPKAP1
C [auth E]Rapamycin-insensitive companion of mTOR
B [auth C]Target of rapamycin complex subunit LST8
Serine/threonine-protein kinase mTOR

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth G]IPR032679Sin1, N-terminalDomain
D [auth G]IPR057339Target of rapamycin complex 2 subunit MAPKAP1-like, Ras-binding domainDomain
D [auth G]IPR031313SAPK-interacting protein 1, Pleckstrin-homology domainDomain
D [auth G]IPR011993PH-like domain superfamilyHomologous Superfamily
D [auth G]IPR031567Sin1, middle CRIM domainDomain
D [auth G]IPR008828TORC2 component Sin1/Avo1Family
C [auth E]IPR028267Rapamycin-insensitive companion of mTOR, N-terminal domainDomain
C [auth E]IPR029451Rapamycin-insensitive companion of mTOR, middle domainDomain
C [auth E]IPR016024Armadillo-type foldHomologous Superfamily
C [auth E]IPR029259Rapamycin-insensitive companion of mTOR, phosphorylation-sitePTM
C [auth E]IPR029453Rapamycin-insensitive companion of mTOR, domain 4Domain
C [auth E]IPR029452Rapamycin-insensitive companion of mTOR, domain 5Domain
C [auth E]IPR028268Pianissimo familyFamily
B [auth C]IPR019775WD40 repeat, conserved siteConserved Site
B [auth C]IPR011047Quinoprotein alcohol dehydrogenase-like superfamilyHomologous Superfamily
B [auth C]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
B [auth C]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
B [auth C]IPR001680WD40 repeatRepeat
B [auth C]IPR037588Target of rapamycin complex subunit LST8Family
IPR016024Armadillo-type foldHomologous Superfamily
IPR009076FKBP12-rapamycin binding domainDomain
IPR057564Serine/threonine-protein kinase ATR-like, HEAT repeatsDomain
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
IPR036940Phosphatidylinositol 3-/4-kinase, catalytic domain superfamilyHomologous Superfamily
IPR014009PIK-related kinase, FAT domainDomain
IPR026683Serine/threonine-protein kinase TOR, catalytic domainDomain
IPR003151PIK-related kinase, FATDomain
IPR036738FKBP12-rapamycin binding domain superfamilyHomologous Superfamily
IPR003152FATC domainDomain
IPR024585Serine/threonine-protein kinase mTOR domainDomain
IPR011989Armadillo-like helicalHomologous Superfamily
IPR000403Phosphatidylinositol 3-/4-kinase, catalytic domainDomain
IPR050517DNA Damage Response and Repair KinaseFamily
IPR018936Phosphatidylinositol 3-/4-kinase, conserved siteConserved Site
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
D [auth G]PharosQ9BPZ7
C [auth E]PharosQ6R327
B [auth C]PharosQ9BVC4
PharosP42345

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
D [auth G]ACE RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

PSI-MOD :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359
D [auth G]SEP Parent Component: SER

RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0037

PSI-MOD :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 , O-phospho-L-serine MOD:00046