9T1B | pdb_00009t1b

E. coli 70S ribosome from delta-RlmE strain, PTC class 2


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth k]Large ribosomal subunit protein uL15
H [auth i]Large ribosomal subunit protein uL13
G [auth e]Large ribosomal subunit protein uL4
F [auth d]Large ribosomal subunit protein uL3
E [auth c]Large ribosomal subunit protein uL2
D [auth b]5S rRNA---
C [auth a]23S rRNA---
B [auth Z]tRNA(fMet)---
N [auth z]Large ribosomal subunit protein bL32
M [auth v]Large ribosomal subunit protein bL27
L [auth r]Large ribosomal subunit protein uL22
K [auth q]Large ribosomal subunit protein bL21
J [auth l]Large ribosomal subunit protein uL16
A [auth Y]tRNA(Phe)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth k]IPR021131Large ribosomal subunit protein uL15/eL18Domain
I [auth k]IPR030878Large ribosomal subunit protein uL15Family
I [auth k]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
I [auth k]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
I [auth k]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
H [auth i]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
H [auth i]IPR005822Large ribosomal subunit protein uL13Family
H [auth i]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
H [auth i]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
G [auth e]IPR013005Large ribosomal subunit protein uL4-likeFamily
G [auth e]IPR002136Large ribosomal subunit protein uL4Family
G [auth e]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth d]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth d]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
F [auth d]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F [auth d]IPR000597Large ribosomal subunit protein uL3Family
E [auth c]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
E [auth c]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
E [auth c]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth c]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth c]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
E [auth c]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth c]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
E [auth c]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
E [auth c]IPR002171Large ribosomal subunit protein uL2Family
N [auth z]IPR002677Large ribosomal subunit protein bL32Family
N [auth z]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
N [auth z]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
M [auth v]IPR001684Large ribosomal subunit protein bL27Family
M [auth v]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
L [auth r]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
L [auth r]IPR001063Large ribosomal subunit protein uL22Family
L [auth r]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
L [auth r]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
L [auth r]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
K [auth q]IPR028909Large ribosomal subunit protein bL21-likeFamily
K [auth q]IPR001787Large ribosomal subunit protein bL21Family
K [auth q]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
K [auth q]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
J [auth l]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
J [auth l]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
J [auth l]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
J [auth l]IPR016180Large ribosomal subunit protein uL16 domainDomain
J [auth l]IPR047873Large ribosomal subunit protein uL16Family

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
F [auth d]MEQ Parent Component: GLN

RESIDAA0071

PSI-MOD :  N5-methyl-L-glutamine MOD:00080
C [auth a]1MG Parent Component: G

RESIDAA0071

C [auth a]2MA Parent Component: A

RESIDAA0071

C [auth a]2MG Parent Component: G

RESIDAA0071

C [auth a]3TD Parent Component: U

RESIDAA0071

C [auth a]5MC Parent Component: C

RESIDAA0071

C [auth a]5MU Parent Component: U

RESIDAA0071

C [auth a]6MZ Parent Component: A

RESIDAA0071

C [auth a]G7M Parent Component: G

RESIDAA0071

C [auth a]H2U Parent Component: U

RESIDAA0071

C [auth a]OMC Parent Component: C

RESIDAA0071

C [auth a]OMG Parent Component: G

RESIDAA0071

C [auth a]PSU Parent Component: U

RESIDAA0071

C [auth a]TKW RESIDAA0071

B [auth Z]4SU Parent Component: U

RESIDAA0071

B [auth Z]5MU Parent Component: U

RESIDAA0071

B [auth Z]H2U Parent Component: U

RESIDAA0071

B [auth Z]OMC Parent Component: C

RESIDAA0071

B [auth Z]PSU Parent Component: U

RESIDAA0071

J [auth l]4D4 Parent Component: ARG

RESIDAA0071

J [auth l]MS6 Parent Component: MET

A [auth Y]3AU Parent Component: U

RESIDAA0071

A [auth Y]4SU Parent Component: U

RESIDAA0071

A [auth Y]5MU Parent Component: U

RESIDAA0071

A [auth Y]7MG Parent Component: G

RESIDAA0071

A [auth Y]H2U Parent Component: U

RESIDAA0071

A [auth Y]MIA Parent Component: A

RESIDAA0071

A [auth Y]PSU Parent Component: U

RESIDAA0071