9SZV | pdb_00009szv

Co-chaperone Bag1-bound human 26S proteasome in SBAG1.3 state

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
P [auth o]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064074 3000131 SCOP2B (2022-06-29)
W [auth O]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064074 3000131 SCOP2B (2022-06-29)
O [auth n]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079175 3000131 SCOP2B (2022-06-29)
V [auth N]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079175 3000131 SCOP2B (2022-06-29)
G [auth K]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064022 3000131 SCOP2B (2022-06-29)
M [auth k]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064022 3000131 SCOP2B (2022-06-29)
F [auth M]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064054 3000131 SCOP2B (2022-06-29)
N [auth m]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064054 3000131 SCOP2B (2022-06-29)
E [auth L]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064060 3000131 SCOP2B (2022-06-29)
H [auth l]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064060 3000131 SCOP2B (2022-06-29)
D [auth J]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064004 3000131 SCOP2B (2022-06-29)
L [auth j]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064004 3000131 SCOP2B (2022-06-29)
C [auth I]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064036 3000131 SCOP2B (2022-06-29)
K [auth i]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064036 3000131 SCOP2B (2022-06-29)
NA [auth Z]SCOP2B SuperfamilyJAB1/MPN domain-like 8053252 3001105 SCOP2B (2022-06-29)
NA [auth Z]SCOP2B SuperfamilyEIF3 subunit F C-terminal domain-like 8053251 3002167 SCOP2B (2022-06-29)
MA [auth Y]SCOP2B SuperfamilyTPR-like 8057045 3001345 SCOP2B (2022-06-29)
MA [auth Y]SCOP2B SuperfamilyWinged helix DNA-binding domain 8057047 3000034 SCOP2B (2022-06-29)
LA [auth X]SCOP2B SuperfamilyWinged helix DNA-binding domain 8067905 3000034 SCOP2B (2022-06-29)
IA [auth e]SCOP2B SuperfamilyDSS1/SEM1 protein family 8053396 3002183 SCOP2B (2022-06-29)
B [auth H]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064014 3000131 SCOP2B (2022-06-29)
J [auth h]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064014 3000131 SCOP2B (2022-06-29)
GA [auth c]SCOP2B SuperfamilyEIF3 subunit F C-terminal domain-like 8053254 3002167 SCOP2B (2022-06-29)
GA [auth c]SCOP2B SuperfamilyJAB1/MPN domain-like 8053255 3001105 SCOP2B (2022-06-29)
DA [auth x]SCOP2B SuperfamilyUbiquitin-like 8033376 3000157 SCOP2B (2022-06-29)
S [auth r]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079492 3000131 SCOP2B (2022-06-29)
Z [auth R]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079492 3000131 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
P [auth o],
W [auth O]		PF12465Proteasome beta subunits C terminal (Pr_beta_C)Proteasome beta subunits C terminal- Family
G [auth K],
M [auth k]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
G [auth K],
M [auth k]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
F [auth M],
N [auth m]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
F [auth M],
N [auth m]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
E [auth L],
H [auth l]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
E [auth L],
H [auth l]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
D [auth J],
L [auth j]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
D [auth J],
L [auth j]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
UA [auth F]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
UA [auth F]PF17781RPN1 N-terminal domain (RPN1_RPN2_N)RPN1 N-terminal domain- Repeat
UA [auth F]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
UA [auth F]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
TA [auth E]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
TA [auth E]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
TA [auth E]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
SA [auth D]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
SA [auth D]PF10075CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K)CSN8/PSMD8/EIF3K family- Family
SA [auth D]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
SA [auth D]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
RA [auth C]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
RA [auth C]PF2359426S proteasome regulatory subunit RPN11 C-terminal domain (RPN11_C)26S proteasome regulatory subunit RPN11 C-terminal domainThis entry represents the C-terminal helical region of 26S proteosomal subunits. This region is involved in forming a helical bundle with other RPN subunits to help with assembly of the proteosome lid [1]. Domain
RA [auth C]PF01398JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB)JAB1/Mov34/MPN/PAD-1 ubiquitin proteaseProteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or J ...Proteins with this domain are found in proteasome regulatory subunits, eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This domain is known as the MPN domain [3] and PAD-1-like domain [4], JABP1 domain [5] or JAMM domain [7]. These are metalloenzymes that function as the ubiquitin isopeptidase/ deubiquitinase in the ubiquitin-based signalling and protein turnover pathways in eukaryotes [7]. Versions of the domain in prokaryotic cognates of the ubiquitin-modification pathway are shown to have a similar role, and the archaeal protein from Haloferax volcanii is found to cleave ubiquitin-like small archaeal modifier proteins (SAMP1/2) from protein conjugates [8,9].
Domain
RA [auth C]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
RA [auth C]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
C [auth I],
K [auth i]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
C [auth I],
K [auth i]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
QA [auth B]PF16450Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)Proteasomal ATPase OB C-terminal domainThis is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] Domain
QA [auth B]PF13519von Willebrand factor type A domain (VWA_2)von Willebrand factor type A domainDomain
QA [auth B]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
QA [auth B]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
PA [auth A]PF22037PSD13 N-terminal repeats (PSD13_N)PSD13 N-terminal repeats- Repeat
PA [auth A]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
PA [auth A]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
PA [auth A]PF2123626S proteasome regulatory subunit 7, OB domain (OB_PRS7)26S proteasome regulatory subunit 7, OB domainThis is the OB domain from 26S proteasome regulatory subunit 7 (PRS7, also known as PSMC2, Rpt1 or MSS1), a component of the 19S proteasome cap [1-5]. These are one of six ATPases of the regulatory particle that form a heterohexameric ring. This doma ...This is the OB domain from 26S proteasome regulatory subunit 7 (PRS7, also known as PSMC2, Rpt1 or MSS1), a component of the 19S proteasome cap [1-5]. These are one of six ATPases of the regulatory particle that form a heterohexameric ring. This domain mediates interactions with USP14 or Ubp6 [2,4].
Domain
PA [auth A]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
OA [auth W]PF1809826S proteasome regulatory subunit RPN5 C-terminal domain (RPN5_C)26S proteasome regulatory subunit RPN5 C-terminal domainThis is the C-terminal domain of the 26S proteasome regulatory subunit RPN5 proteins.This helical domain can be found adjacent to Pfam:PF01399. The 26S proteasome is the major ATP-dependent protease in eukaryotes. Three subcomplexes form this degrada ...This is the C-terminal domain of the 26S proteasome regulatory subunit RPN5 proteins.This helical domain can be found adjacent to Pfam:PF01399. The 26S proteasome is the major ATP-dependent protease in eukaryotes. Three subcomplexes form this degradation machine: the lid, the base, and the core. The helices found at the C terminus of each lid subunit form a helical bundle that directs the ordered self-assembly of the lid subcomplex. This domain which comprises the tail of RPN5 along with the tail of Rpn9, are important for Rpn12 binding to the lid [1].
Domain
OA [auth W]PF22241PSMD12/CSN4, N-terminal (PSMD12-CSN4_N)PSMD12/CSN4, N-terminal- Repeat
OA [auth W]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
NA [auth Z]PF13012Maintenance of mitochondrial structure and function (MitMem_reg)Maintenance of mitochondrial structure and function- Family
MA [auth Y]PF2115426S proteasome regulatory subunit RPN7/PSMD6 C-terminal helix (RPN7_PSMD6_C)26S proteasome regulatory subunit RPN7/PSMD6 C-terminal helixRPN7/PSDM6 are regulatory subunits from the 26S proteasome. This entry represents the C-terminal helix. Domain
MA [auth Y]PF1060226S proteasome subunit RPN7 (RPN7)26S proteasome subunit RPN7- Repeat
MA [auth Y]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
LA [auth X]PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
LA [auth X]PF1850326S proteasome subunit RPN6 C-terminal helix domain (RPN6_C_helix)26S proteasome subunit RPN6 C-terminal helix domainThis is the C-terminal helix domain found in RPN6, a component of the 26S proteasome. The C-terminal helices are essential for lid assembly [1, 2]. Domain
LA [auth X]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
KA [auth V]PF08375Proteasome regulatory subunit C-terminal (Rpn3_C)Proteasome regulatory subunit C-terminal- Family
KA [auth V]PF25573PSMD3-like, N-terminal TPR repeats (TPR_PSMD3_N)PSMD3-like, N-terminal TPR repeats- Repeat
KA [auth V]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. Domain
JA [auth U]PF13646HEAT repeats (HEAT_2)HEAT repeats- Repeat
JA [auth U]PF1800426S proteasome regulatory subunit RPN2 C-terminal domain (RPN2_C)26S proteasome regulatory subunit RPN2 C-terminal domainThis is the C-terminal domain found in S. cerevisiae Rpn2 (26S proteasome regulatory subunit RPN2) as well as other eukaryotic species. A study revealed that the C-terminal 52 residues of the Rpn2 C-terminal domain are responsible for mediating inter ...This is the C-terminal domain found in S. cerevisiae Rpn2 (26S proteasome regulatory subunit RPN2) as well as other eukaryotic species. A study revealed that the C-terminal 52 residues of the Rpn2 C-terminal domain are responsible for mediating interactions with the ubiquitin-binding subunit Rpn13. Futhermore, the extreme C-terminal 20 or 21 residues of Rpn2 (926-945 or 925-945) of S. cerevisiae, were shown to be equally effective at binding Rpn13. Multiple sequence alignments indicate that Rpn2 orthologs are highly conserved in this C-terminal region and share characteristic acidic, aromatic, and proline residues, suggesting a common function. In the structure of Rpn2 from S. cerevisiae , this region is exposed and disordered, and is thus accessible for associating with Rpn13. The Rpn2 binding surface of human Rpn13 has been mapped by nuclear magnetic resonance titration to one surface of its Pru domain [1].
Domain
JA [auth U]PF01851Proteasome/cyclosome repeat (PC_rep)Proteasome/cyclosome repeat- Repeat
B [auth H],
J [auth h]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
B [auth H],
J [auth h]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
BA [auth T],
U [auth t]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
AA [auth S],
T [auth s]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
R [auth q],
X [auth Q]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
Q [auth p],
Y [auth P]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
A [auth G],
I [auth g]		PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
A [auth G],
I [auth g]		PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
P [auth o],
W [auth O]		Proteasome subunit beta type-7
O [auth n],
V [auth N]		Proteasome subunit beta type-6
G [auth K],
M [auth k]		Proteasome subunit alpha type-5-
F [auth M],
N [auth m]		Proteasome subunit alpha type-3
E [auth L],
H [auth l]		Isoform Long of Proteasome subunit alpha type-1
D [auth J],
L [auth j]		Proteasome subunit alpha type-7
UA [auth F]26S protease regulatory subunit 6A
TA [auth E]26S proteasome regulatory subunit 10B -
SA [auth D]26S protease regulatory subunit 6B
RA [auth C]Isoform 2 of 26S proteasome regulatory subunit 8
C [auth I],
K [auth i]		Proteasome subunit alpha type-4-
QA [auth B]26S protease regulatory subunit 4
PA [auth A]26S protease regulatory subunit 7
OA [auth W]26S proteasome non-ATPase regulatory subunit 12-
NA [auth Z]26S proteasome non-ATPase regulatory subunit 7
MA [auth Y]26S proteasome non-ATPase regulatory subunit 6-
LA [auth X]26S proteasome non-ATPase regulatory subunit 11
KA [auth V]26S proteasome non-ATPase regulatory subunit 3
JA [auth U]26S proteasome non-ATPase regulatory subunit 1
IA [auth e]26S proteasome complex subunit SEM1
HA [auth d]26S proteasome non-ATPase regulatory subunit 8-
B [auth H],
J [auth h]		Proteasome subunit alpha type-2-
GA [auth c]26S proteasome non-ATPase regulatory subunit 14
FA [auth b]26S proteasome non-ATPase regulatory subunit 4
EA [auth a]26S proteasome non-ATPase regulatory subunit 13
DA [auth x]BAG family molecular chaperone regulator 1
CA [auth f]26S proteasome non-ATPase regulatory subunit 2
BA [auth T],
U [auth t]		Proteasome subunit beta type-4
AA [auth S],
T [auth s]		Proteasome subunit beta type-1-
S [auth r],
Z [auth R]		Proteasome subunit beta type-5
R [auth q],
X [auth Q]		Proteasome subunit beta type-2-
Q [auth p],
Y [auth P]		Proteasome subunit beta type-3-
A [auth G],
I [auth g]		Proteasome subunit alpha type-6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
P [auth o],
W [auth O]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
P [auth o],
W [auth O]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
P [auth o],
W [auth O]		IPR024689Proteasome beta subunit, C-terminalDomain
P [auth o],
W [auth O]		IPR023333Proteasome B-type subunitFamily
P [auth o],
W [auth O]		IPR001353Proteasome, subunit alpha/betaFamily
P [auth o],
W [auth O]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
O [auth n],
V [auth N]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
O [auth n],
V [auth N]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
O [auth n],
V [auth N]		IPR023333Proteasome B-type subunitFamily
O [auth n],
V [auth N]		IPR001353Proteasome, subunit alpha/betaFamily
O [auth n],
V [auth N]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
G [auth K],
M [auth k]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
G [auth K],
M [auth k]		IPR033812Proteasome subunit alpha5Family
G [auth K],
M [auth k]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
G [auth K],
M [auth k]		IPR050115Proteasome subunit alphaFamily
G [auth K],
M [auth k]		IPR023332Proteasome alpha-type subunitFamily
G [auth K],
M [auth k]		IPR001353Proteasome, subunit alpha/betaFamily
F [auth M],
N [auth m]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
F [auth M],
N [auth m]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
F [auth M],
N [auth m]		IPR050115Proteasome subunit alphaFamily
F [auth M],
N [auth m]		IPR023332Proteasome alpha-type subunitFamily
F [auth M],
N [auth m]		IPR001353Proteasome, subunit alpha/betaFamily
E [auth L],
H [auth l]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
E [auth L],
H [auth l]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
E [auth L],
H [auth l]		IPR050115Proteasome subunit alphaFamily
E [auth L],
H [auth l]		IPR035144Proteasome subunit alpha 1Family
E [auth L],
H [auth l]		IPR023332Proteasome alpha-type subunitFamily
E [auth L],
H [auth l]		IPR001353Proteasome, subunit alpha/betaFamily
D [auth J],
L [auth j]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
D [auth J],
L [auth j]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
D [auth J],
L [auth j]		IPR050115Proteasome subunit alphaFamily
D [auth J],
L [auth j]		IPR023332Proteasome alpha-type subunitFamily
D [auth J],
L [auth j]		IPR001353Proteasome, subunit alpha/betaFamily
UA [auth F]IPR05022126S Proteasome Regulatory ATPaseFamily
UA [auth F]IPR003593AAA+ ATPase domainDomain
UA [auth F]IPR003959ATPase, AAA-type, coreDomain
UA [auth F]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
UA [auth F]IPR041569AAA ATPase, AAA+ lid domainDomain
UA [auth F]IPR032501Proteasomal ATPase, second OB domainDomain
UA [auth F]IPR003960ATPase, AAA-type, conserved siteConserved Site
UA [auth F]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
TA [auth E]IPR05022126S Proteasome Regulatory ATPaseFamily
TA [auth E]IPR041569AAA ATPase, AAA+ lid domainDomain
TA [auth E]IPR032501Proteasomal ATPase, second OB domainDomain
TA [auth E]IPR003960ATPase, AAA-type, conserved siteConserved Site
TA [auth E]IPR003593AAA+ ATPase domainDomain
TA [auth E]IPR003959ATPase, AAA-type, coreDomain
TA [auth E]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
TA [auth E]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
SA [auth D]IPR05022126S Proteasome Regulatory ATPaseFamily
SA [auth D]IPR041569AAA ATPase, AAA+ lid domainDomain
SA [auth D]IPR032501Proteasomal ATPase, second OB domainDomain
SA [auth D]IPR003960ATPase, AAA-type, conserved siteConserved Site
SA [auth D]IPR003593AAA+ ATPase domainDomain
SA [auth D]IPR003959ATPase, AAA-type, coreDomain
SA [auth D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SA [auth D]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
RA [auth C]IPR05022126S Proteasome Regulatory ATPaseFamily
RA [auth C]IPR003593AAA+ ATPase domainDomain
RA [auth C]IPR003959ATPase, AAA-type, coreDomain
RA [auth C]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
RA [auth C]IPR041569AAA ATPase, AAA+ lid domainDomain
RA [auth C]IPR032501Proteasomal ATPase, second OB domainDomain
RA [auth C]IPR003960ATPase, AAA-type, conserved siteConserved Site
RA [auth C]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth I],
K [auth i]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
C [auth I],
K [auth i]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
C [auth I],
K [auth i]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
C [auth I],
K [auth i]		IPR050115Proteasome subunit alphaFamily
C [auth I],
K [auth i]		IPR023332Proteasome alpha-type subunitFamily
C [auth I],
K [auth i]		IPR001353Proteasome, subunit alpha/betaFamily
QA [auth B]IPR05022126S Proteasome Regulatory ATPaseFamily
QA [auth B]IPR041569AAA ATPase, AAA+ lid domainDomain
QA [auth B]IPR032501Proteasomal ATPase, second OB domainDomain
QA [auth B]IPR003960ATPase, AAA-type, conserved siteConserved Site
QA [auth B]IPR003593AAA+ ATPase domainDomain
QA [auth B]IPR003959ATPase, AAA-type, coreDomain
QA [auth B]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QA [auth B]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
PA [auth A]IPR05022126S Proteasome Regulatory ATPaseFamily
PA [auth A]IPR003593AAA+ ATPase domainDomain
PA [auth A]IPR003959ATPase, AAA-type, coreDomain
PA [auth A]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
PA [auth A]IPR04872326S proteasome regulatory subunit 7-like, OB domainDomain
PA [auth A]IPR041569AAA ATPase, AAA+ lid domainDomain
PA [auth A]IPR003960ATPase, AAA-type, conserved siteConserved Site
PA [auth A]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
OA [auth W]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
OA [auth W]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
OA [auth W]IPR000717Proteasome component (PCI) domainDomain
OA [auth W]IPR04089626S proteasome regulatory subunit RPN5, C-terminal domainDomain
OA [auth W]IPR04013426S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4Family
OA [auth W]IPR054559PSMD12/CSN4-like, N-terminalDomain
NA [auth Z]IPR03385826S Proteasome non-ATPase regulatory subunit 7/8Family
NA [auth Z]IPR024969EIF3F/CSN6-like, C-terminalDomain
NA [auth Z]IPR037518MPN domainDomain
NA [auth Z]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
MA [auth Y]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
MA [auth Y]IPR01958526S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1Family
MA [auth Y]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
MA [auth Y]IPR04954926S proteasome regulatory subunit RPN7/PSMD6, C-terminal helixDomain
MA [auth Y]IPR000717Proteasome component (PCI) domainDomain
MA [auth Y]IPR04513526S proteasome regulatory subunit Rpn7, N-terminalDomain
LA [auth X]IPR05087126S Proteasome and COP9 Signalosome ComponentsFamily
LA [auth X]IPR0407806S proteasome subunit Rpn6, C-terminal helix domainDomain
LA [auth X]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
LA [auth X]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
LA [auth X]IPR04077326S proteasome regulatory subunit Rpn6, N-terminalDomain
LA [auth X]IPR000717Proteasome component (PCI) domainDomain
KA [auth V]IPR01358626S proteasome non-ATPase regulatory subunit 3, C-terminalDomain
KA [auth V]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
KA [auth V]IPR050756COP9 signalosome complex subunit 3Family
KA [auth V]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
KA [auth V]IPR000717Proteasome component (PCI) domainDomain
KA [auth V]IPR05798526S proteasome non-ATPase regulatory subunit 3, N-terminal TPR repeatsDomain
JA [auth U]IPR04062326S proteasome regulatory subunit RPN2, C-terminalDomain
JA [auth U]IPR016024Armadillo-type foldHomologous Superfamily
JA [auth U]IPR002015Proteasome/cyclosome repeatRepeat
JA [auth U]IPR011989Armadillo-like helicalHomologous Superfamily
JA [auth U]IPR04857026S proteasome non-ATPase regulatory subunit 1/RPN2, N-terminal domainDomain
JA [auth U]IPR01664226S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunitFamily
IA [auth e]IPR007834DSS1/SEM1Family
HA [auth d]IPR000717Proteasome component (PCI) domainDomain
HA [auth d]IPR00674626S proteasome non-ATPase regulatory subunit Rpn12Family
HA [auth d]IPR033464CSN8/PSMD8/EIF3KDomain
B [auth H],
J [auth h]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
B [auth H],
J [auth h]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
B [auth H],
J [auth h]		IPR050115Proteasome subunit alphaFamily
B [auth H],
J [auth h]		IPR023332Proteasome alpha-type subunitFamily
B [auth H],
J [auth h]		IPR001353Proteasome, subunit alpha/betaFamily
GA [auth c]IPR05626326S proteasome regulatory subunit RPN11, C-terminal domainDomain
GA [auth c]IPR050242JAMM/MPN+ metalloenzymes, peptidase M67AFamily
GA [auth c]IPR037518MPN domainDomain
GA [auth c]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
FA [auth b]IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
FA [auth b]IPR02704026S proteasome non-ATPase regulatory subunit 4Family
FA [auth b]IPR002035von Willebrand factor, type ADomain
FA [auth b]IPR003903Ubiquitin interacting motifConserved Site
FA [auth b]IPR049590PSMD4, RAZUL domainDomain
EA [auth a]IPR054179PSD13, N-terminalDomain
EA [auth a]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
EA [auth a]IPR03529826S Proteasome non-ATPase regulatory subunit 13Family
EA [auth a]IPR000717Proteasome component (PCI) domainDomain
DA [auth x]IPR003103BAG domainDomain
DA [auth x]IPR000626Ubiquitin-like domainDomain
DA [auth x]IPR036533BAG domain superfamilyHomologous Superfamily
DA [auth x]IPR039773Molecular chaperone regulator BAGFamily
DA [auth x]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
CA [auth f]IPR04143326S proteasome non-ATPase regulatory subunit RPN1, C-terminalDomain
CA [auth f]IPR016024Armadillo-type foldHomologous Superfamily
CA [auth f]IPR002015Proteasome/cyclosome repeatRepeat
CA [auth f]IPR01664326S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunitFamily
CA [auth f]IPR011989Armadillo-like helicalHomologous Superfamily
CA [auth f]IPR040892RPN1, N-terminalDomain
BA [auth T],
U [auth t]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
BA [auth T],
U [auth t]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
BA [auth T],
U [auth t]		IPR023333Proteasome B-type subunitFamily
BA [auth T],
U [auth t]		IPR016295Proteasome subunit beta 4Family
BA [auth T],
U [auth t]		IPR001353Proteasome, subunit alpha/betaFamily
AA [auth S],
T [auth s]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
AA [auth S],
T [auth s]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
AA [auth S],
T [auth s]		IPR023333Proteasome B-type subunitFamily
AA [auth S],
T [auth s]		IPR001353Proteasome, subunit alpha/betaFamily
S [auth r],
Z [auth R]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
S [auth r],
Z [auth R]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
S [auth r],
Z [auth R]		IPR023333Proteasome B-type subunitFamily
S [auth r],
Z [auth R]		IPR001353Proteasome, subunit alpha/betaFamily
S [auth r],
Z [auth R]		IPR000243Peptidase T1A, proteasome beta-subunitFamily
R [auth q],
X [auth Q]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
R [auth q],
X [auth Q]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
R [auth q],
X [auth Q]		IPR023333Proteasome B-type subunitFamily
R [auth q],
X [auth Q]		IPR001353Proteasome, subunit alpha/betaFamily
R [auth q],
X [auth Q]		IPR035206Proteasome subunit beta 2Family
Q [auth p],
Y [auth P]		IPR016050Proteasome beta-type subunit, conserved siteConserved Site
Q [auth p],
Y [auth P]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
Q [auth p],
Y [auth P]		IPR023333Proteasome B-type subunitFamily
Q [auth p],
Y [auth P]		IPR001353Proteasome, subunit alpha/betaFamily
Q [auth p],
Y [auth P]		IPR033811Proteasome beta 3 subunitFamily
A [auth G],
I [auth g]		IPR034642Proteasome subunit alpha6Family
A [auth G],
I [auth g]		IPR000426Proteasome alpha-subunit, N-terminal domainDomain
A [auth G],
I [auth g]		IPR050115Proteasome subunit alphaFamily
A [auth G],
I [auth g]		IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
A [auth G],
I [auth g]		IPR023332Proteasome alpha-type subunitFamily
A [auth G],
I [auth g]		IPR001353Proteasome, subunit alpha/betaFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
P [auth o],
W [auth O]		Pharos:  Q99436
O [auth n],
V [auth N]		Pharos:  P28072
G [auth K],
M [auth k]		Pharos:  P28066
F [auth M],
N [auth m]		Pharos:  P25788
E [auth L],
H [auth l]		Pharos:  P25786
D [auth J],
L [auth j]		Pharos:  O14818
UA [auth F]Pharos:  P17980
SA [auth D]Pharos:  P43686
RA [auth C]Pharos:  P62195
C [auth I],
K [auth i]		Pharos:  P25789
PA [auth A]Pharos:  P35998
OA [auth W]Pharos:  O00232
NA [auth Z]Pharos:  P51665
MA [auth Y]Pharos:  Q15008
LA [auth X]Pharos:  O00231
KA [auth V]Pharos:  O43242
JA [auth U]Pharos:  Q99460
IA [auth e]Pharos:  P60896
HA [auth d]Pharos:  P48556
B [auth H],
J [auth h]		Pharos:  P25787
GA [auth c]Pharos:  O00487
FA [auth b]Pharos:  P55036
EA [auth a]Pharos:  Q9UNM6
DA [auth x]Pharos:  Q99933
CA [auth f]Pharos:  Q13200
BA [auth T],
U [auth t]		Pharos:  P28070
AA [auth S],
T [auth s]		Pharos:  P20618
S [auth r],
Z [auth R]		Pharos:  P28074
R [auth q],
X [auth Q]		Pharos:  P49721
Q [auth p],
Y [auth P]		Pharos:  P49720
A [auth G],
I [auth g]		Pharos:  P60900