Annotations: 9SHT

Cryo-EM structure of human fibrillar procollagen type I C-propeptide heterotrimer complexed with PCPE-1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D	Procollagen C-endopeptidase enhancer 1	enzyme regulator activity enzyme activator activity peptidase regulator activity molecular function activator activity molecular function regulator activity peptidase activator activity collagen binding protein-containing complex binding binding heparin binding glycosaminoglycan binding carbohydrate derivative binding sulfur compound binding	biosynthetic process collagen biosynthetic process metabolic process cellular process collagen metabolic process proteolysis primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle vesicle extracellular membrane-bounded organelle basement membrane extracellular matrix external encapsulating structure non-collagenous component of basement membrane solid phase of basement membrane
C	Collagen alpha-2(I) chain	protein binding binding enzyme binding protease binding protein-macromolecule adaptor activity molecular adaptor activity structural molecule activity extracellular matrix structural constituent extracellular matrix structural constituent conferring tensile strength SMAD binding platelet-derived growth factor binding growth factor binding identical protein binding	multicellular organismal process system process circulatory system process regulation of blood pressure biological regulation regulation of biological quality blood circulation developmental process multicellular organism development skeletal system development anatomical structure development animal gross anatomical part developmental process system development skin development multicellular organismal process system process circulatory system process regulation of blood pressure biological regulation regulation of biological quality blood circulation developmental process multicellular organism development skeletal system development anatomical structure development animal gross anatomical part developmental process system development skin development animal organ development cellular component organization collagen fibril organization extracellular matrix organization cellular process cellular component organization or biogenesis extracellular structure organization external encapsulating structure organization anatomical structure morphogenesis odontogenesis animal organ morphogenesis vasculature development blood vessel development circulatory system development skin morphogenesis cellular response to stimulus regulation of biological process small GTPase-mediated signal transduction regulation of cellular process response to stimulus signaling Rho protein signal transduction intracellular signal transduction cell communication intracellular signaling cassette signal transduction cellular response to growth factor stimulus cell surface receptor protein serine/threonine kinase signaling pathway cell surface receptor signaling pathway cellular response to transforming growth factor beta stimulus response to endogenous stimulus cellular response to endogenous stimulus response to transforming growth factor beta transforming growth factor beta receptor signaling pathway response to growth factor transforming growth factor beta receptor superfamily signaling pathway enzyme-linked receptor protein signaling pathway	solid phase of interstitial matrix protein-containing complex extracellular matrix extracellular region fibrillar collagen complex collagen trimer fibrillar collagen trimer cellular anatomical structure external encapsulating structure complex of collagen trimers collagen type I trimer extracellular protein-containing complex supramolecular complex collagenous component of interstitial matrix solid phase of interstitial matrix protein-containing complex extracellular matrix extracellular region fibrillar collagen complex collagen trimer fibrillar collagen trimer cellular anatomical structure external encapsulating structure complex of collagen trimers collagen type I trimer extracellular protein-containing complex supramolecular complex collagenous component of interstitial matrix interstitial matrix extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle organelle lumen endoplasmic reticulum cytoplasm
A, B	Collagen alpha-1(I) chain	protein binding binding enzyme binding protease binding structural molecule activity extracellular matrix structural constituent extracellular matrix structural constituent conferring tensile strength platelet-derived growth factor binding growth factor binding identical protein binding	response to stimulus response to chemical response to xenobiotic stimulus developmental process multicellular organismal process cellular developmental process ossification cell differentiation cellular process osteoblast differentiation cellular response to endogenous stimulus cellular response to growth factor stimulus response to transforming growth factor beta cellular response to transforming growth factor beta stimulus response to stimulus response to chemical response to xenobiotic stimulus developmental process multicellular organismal process cellular developmental process ossification cell differentiation cellular process osteoblast differentiation cellular response to endogenous stimulus cellular response to growth factor stimulus response to transforming growth factor beta cellular response to transforming growth factor beta stimulus response to endogenous stimulus response to growth factor multicellular organism development skeletal system development anatomical structure development animal gross anatomical part developmental process system development cellular response to stimulus cellular response to chemical stimulus cellular response to fluoride response to fluoride regulation of epithelial to mesenchymal transition regulation of cellular process regulation of developmental process positive regulation of biological process positive regulation of epithelial to mesenchymal transition regulation of cell differentiation mesenchyme development positive regulation of developmental process positive regulation of cell differentiation regulation of multicellular organismal process positive regulation of cellular process regulation of biological process biological regulation animal organ development tissue development epithelial to mesenchymal transition positive regulation of multicellular organismal process mesenchymal cell differentiation homeostatic process response to oxygen-containing compound cellular response to glucose stimulus intracellular glucose homeostasis cellular response to oxygen-containing compound response to hexose cellular response to carbohydrate stimulus cellular homeostasis response to monosaccharide response to carbohydrate chemical homeostasis response to glucose glucose homeostasis carbohydrate homeostasis cellular response to hexose stimulus intracellular chemical homeostasis cellular response to monosaccharide stimulus response to lipid response to retinoic acid cellular response to retinoic acid cellular response to lipid biosynthetic process collagen biosynthetic process metabolic process collagen metabolic process cellular response to aldehyde cellular response to acetaldehyde response to acetaldehyde response to fibroblast growth factor cellular response to fibroblast growth factor stimulus cellular component organization collagen fibril organization extracellular matrix organization cellular component organization or biogenesis extracellular structure organization external encapsulating structure organization cellular response to vitamin E response to nutrient levels response to nutrient response to vitamin response to vitamin E cellular response to nutrient levels cellular response to vitamin cellular response to nutrient response to peptide cellular response to tumor necrosis factor response to cytokine cellular response to cytokine stimulus response to tumor necrosis factor response to mechanical stimulus response to external stimulus response to abiotic stimulus cellular response to mechanical stimulus cellular response to abiotic stimulus cellular response to external stimulus cellular response to environmental stimulus positive regulation of locomotion regulation of cell motility positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion response to hormone response to peptide hormone response to insulin response to nitrogen compound response to steroid hormone chordate embryonic development embryo development embryo development ending in birth or egg hatching embryonic skeletal system development system process sensory perception nervous system process sensory perception of sound sensory perception of mechanical stimulus positive regulation of DNA-templated transcription RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process sensory perception of light stimulus visual perception response to organophosphorus response to purine-containing compound response to cAMP vasculature development blood vessel development circulatory system development positive regulation of cell communication positive regulation of signal transduction signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway regulation of signal transduction cell communication positive regulation of response to stimulus positive regulation of Wnt signaling pathway signal transduction Wnt signaling pathway positive regulation of canonical Wnt signaling pathway regulation of signaling cell surface receptor signaling pathway regulation of Wnt signaling pathway regulation of response to stimulus regulation of cell communication positive regulation of signaling anatomical structure morphogenesis skin development skin morphogenesis animal organ morphogenesis tooth mineralization odontogenesis biomineral tissue development cellular response to epidermal growth factor stimulus response to epidermal growth factor response to hydrogen peroxide response to oxidative stress response to stress response to reactive oxygen species localization protein localization to organelle macromolecule localization protein localization to nucleus intracellular protein localization response to estradiol response to oxygen levels response to hyperoxia response to increased oxygen levels	solid phase of interstitial matrix protein-containing complex extracellular matrix extracellular region fibrillar collagen complex collagen trimer fibrillar collagen trimer cellular anatomical structure external encapsulating structure complex of collagen trimers collagen type I trimer extracellular protein-containing complex supramolecular complex collagenous component of interstitial matrix solid phase of interstitial matrix protein-containing complex extracellular matrix extracellular region fibrillar collagen complex collagen trimer fibrillar collagen trimer cellular anatomical structure external encapsulating structure complex of collagen trimers collagen type I trimer extracellular protein-containing complex supramolecular complex collagenous component of interstitial matrix interstitial matrix membrane-bounded organelle intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle organelle secretory granule secretory vesicle cytoplasm vesicle membrane-enclosed lumen intracellular organelle lumen endoplasmic reticulum lumen organelle lumen endoplasmic reticulum

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D	IPR001134	Netrin domain	Domain
D	IPR008993	Tissue inhibitor of metalloproteinases-like, OB-fold	Homologous Superfamily
D	IPR035914	Spermadhesin, CUB domain superfamily	Homologous Superfamily
D	IPR035814	Procollagen C-endopeptidase enhancer, NTR domain	Domain
D	IPR000859	CUB domain	Domain
D	IPR018933	Netrin module, non-TIMP type	Domain
C	IPR008160	Collagen triple helix repeat	Repeat
C	IPR000885	Fibrillar collagen, C-terminal	Domain
C	IPR050149	Collagen_superfamily	Unknown
A, B	IPR008160	Collagen triple helix repeat	Repeat
A, B	IPR000885	Fibrillar collagen, C-terminal	Domain
A, B	IPR001007	VWFC domain	Domain
A, B	IPR050149	Collagen_superfamily	Unknown

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
D	: Q15113	cirrhosis of liver malignant pancreatic neoplasm pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia ulcerative colitis breast cancer Drug-Induced Liver Disease Hashimoto thyroiditis interstitial cystitis malignant glioma medulloblastoma pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma diabetes mellitus drug-induced liver injury cirrhosis of liver malignant pancreatic neoplasm pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia ulcerative colitis breast cancer Drug-Induced Liver Disease Hashimoto thyroiditis interstitial cystitis malignant glioma medulloblastoma pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma diabetes mellitus drug-induced liver injury gastric carcinoma juvenile dermatomyositis malignant mesothelioma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm pituitary cancer Duchenne muscular dystrophy glioblastoma limb-girdle muscular dystrophy
C	: P08123	Ehlers-Danlos syndrome osteogenesis imperfecta osteogenesis imperfecta type 3 osteogenesis imperfecta type 4 osteogenesis imperfecta type 2 Ehlers-Danlos syndrome, cardiac valvular type oral submucous fibrosis heart valve disease Fibrosis osteoporosis cirrhosis of liver Ehlers-Danlos syndrome type 7B osteogenesis imperfecta type 1 systemic sclerosis non-small cell lung carcinoma Ehlers-Danlos syndrome osteogenesis imperfecta osteogenesis imperfecta type 3 osteogenesis imperfecta type 4 osteogenesis imperfecta type 2 Ehlers-Danlos syndrome, cardiac valvular type oral submucous fibrosis heart valve disease Fibrosis osteoporosis cirrhosis of liver Ehlers-Danlos syndrome type 7B osteogenesis imperfecta type 1 systemic sclerosis non-small cell lung carcinoma ulcerative colitis osteoarthritis esophageal adenocarcinoma osteochondrodysplasia gastric carcinoma atopic eczema invasive ductal breast carcinoma pancreatic ductal adenocarcinoma breast cancer limb-girdle muscular dystrophy Pick disease lung adenocarcinoma Crohn disease malignant ependymoma pterygium diabetes mellitus Marfan syndrome subependymal giant cell astrocytoma nasopharyngeal carcinoma thoracic aortic aneurysm ehlers-danlos syndrome, arthrochalasia type, 2 oligodendroglioma osteoarthritis susceptibility 1 glioblastoma intellectual disability osteosarcoma atypical teratoid rhabdoid tumor juvenile dermatomyositis pancreatic intraductal papillary-mucinous carcinoma breast carcinoma pilocytic astrocytoma lung cancer primitive neuroectodermal tumor cystic fibrosis malignant glioma Sjogren syndrome Duchenne muscular dystrophy medulloblastoma nephrosclerosis transitional cell carcinoma Ehlers-Danlos syndrome, arthrochalasis type Emery-Dreifuss muscular dystrophy head and neck cancer astrocytic tumor interstitial lung disease ovarian cancer Becker muscular dystrophy large cell medulloblastoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia chronic obstructive pulmonary disease pituitary cancer malignant colon neoplasm psoriasis dentinogenesis imperfecta malignant pancreatic neoplasm ductal breast carcinoma in situ mucopolysaccharidosis type 4
A, B	: P02452	osteogenesis imperfecta Caffey disease dermatofibrosarcoma protuberans Ehlers-Danlos syndrome, classic type, 1 osteogenesis imperfecta type 3 osteoporosis oral submucous fibrosis osteogenesis imperfecta type 4 Ehlers-Danlos syndrome keloid Ehlers-Danlos syndrome, arthrochalasis type aortic valve insufficiency nephrogenic systemic fibrosis nephrotic syndrome osteogenesis imperfecta type 2 osteogenesis imperfecta Caffey disease dermatofibrosarcoma protuberans Ehlers-Danlos syndrome, classic type, 1 osteogenesis imperfecta type 3 osteoporosis oral submucous fibrosis osteogenesis imperfecta type 4 Ehlers-Danlos syndrome keloid Ehlers-Danlos syndrome, arthrochalasis type aortic valve insufficiency nephrogenic systemic fibrosis nephrotic syndrome osteogenesis imperfecta type 2 Aneurysm, Dissecting autoimmune disease heart valve disease extrahepatic cholestasis osteogenesis imperfecta type 1 cholangitis hypertensive disorder cirrhosis of liver calcinosis pancreatic intraductal papillary-mucinous carcinoma pituitary cancer Duchenne muscular dystrophy limb-girdle muscular dystrophy psoriasis lung adenocarcinoma malignant ependymoma tuberculosis medulloblastoma esophageal adenocarcinoma nasopharyngeal carcinoma non-small cell lung carcinoma breast carcinoma Gaucher disease carpal tunnel syndrome interstitial cystitis ovarian cancer Crohn disease invasive ductal breast carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia large cell medulloblastoma ductal breast carcinoma in situ pterygium Ehlers-Danlos syndrome type 7A lung cancer thoracic aortic aneurysm malignant glioma Ehlers-Danlos syndrome, classic type, 2 Becker muscular dystrophy glioblastoma interstitial lung disease pancreatic ductal adenocarcinoma dentinogenesis imperfecta juvenile dermatomyositis pilocytic astrocytoma primitive neuroectodermal tumor Sjogren syndrome malignant colon neoplasm transitional cell carcinoma Ehlers-Danlos syndrome, classic type malignant pancreatic neoplasm adrenal cortex carcinoma ulcerative colitis Emery-Dreifuss muscular dystrophy mucopolysaccharidosis type 4 atypical teratoid rhabdoid tumor fibrosarcoma breast cancer gastric carcinoma osteochondrodysplasia head and neck cancer chronic obstructive pulmonary disease intervertebral disc degenerative disorder