Annotations: 9RUG

Cryo-EM structure of the LB_DQB0303_A Fab - HLA-DQB103:03/DQA102:01 human alloantibody-HLA complex

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth H]	LB_DQB0303_A Heavy chain	-	-	-
B [auth L]	LB_DQB0303_A Light chain	-	-	-
C [auth B]	Lymphocyte antigen	-	antigen processing and presentation antigen processing and presentation of peptide or polysaccharide antigen via MHC class II immune system process response to stimulus immune response adaptive immune response	vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm organelle membrane lysosome MHC protein complex cell periphery MHC class II protein complex protein-containing complex plasma membrane protein complex plasma membrane membrane protein complex endosome membrane endosome intracellular vesicle endomembrane system cytoplasmic vesicle membrane vesicle membrane cytoplasmic vesicle vesicle
D [auth A]	HLA class II histocompatibility antigen DQ alpha chain	-	antigen processing and presentation antigen processing and presentation of peptide or polysaccharide antigen via MHC class II immune system process response to stimulus immune response adaptive immune response	vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm organelle membrane lysosome MHC protein complex cell periphery MHC class II protein complex protein-containing complex plasma membrane protein complex plasma membrane membrane protein complex endosome membrane endosome intracellular vesicle endomembrane system cytoplasmic vesicle membrane vesicle membrane cytoplasmic vesicle vesicle
E [auth P]	Peptide, unknown sequence	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth B]	IPR000353	MHC class II, beta chain, N-terminal	Domain
C [auth B]	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
C [auth B]	IPR050160	Major Histocompatibility Complex/Immunoglobulin	Family
C [auth B]	IPR014745	MHC class II, alpha/beta chain, N-terminal	Homologous Superfamily
C [auth B]	IPR003597	Immunoglobulin C1-set	Domain
C [auth B]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
C [auth B]	IPR011162	MHC classes I/II-like antigen recognition protein	Homologous Superfamily
C [auth B]	IPR007110	Immunoglobulin-like domain	Domain
C [auth B]	IPR003006	Immunoglobulin/major histocompatibility complex, conserved site	Conserved Site
D [auth A]	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
D [auth A]	IPR050160	Major Histocompatibility Complex/Immunoglobulin	Family
D [auth A]	IPR014745	MHC class II, alpha/beta chain, N-terminal	Homologous Superfamily
D [auth A]	IPR003597	Immunoglobulin C1-set	Domain
D [auth A]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
D [auth A]	IPR011162	MHC classes I/II-like antigen recognition protein	Homologous Superfamily
D [auth A]	IPR007110	Immunoglobulin-like domain	Domain
D [auth A]	IPR001003	MHC class II, alpha chain, N-terminal	Domain
D [auth A]	IPR003006	Immunoglobulin/major histocompatibility complex, conserved site	Conserved Site

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9RUG | pdb_00009rug

Cryo-EM structure of the LB_DQB0303_A Fab - HLA-DQB1*03:03/DQA1*02:01 human alloantibody-HLA complex

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Cryo-EM structure of the LB_DQB0303_A Fab - HLA-DQB103:03/DQA102:01 human alloantibody-HLA complex