Annotations: 9RMV

Crystal Structure of the ERH SAFB2 complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	ERH-like	8043142	3000225	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	ERH-like	8043142	3000225	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01133	Enhancer of rudimentary (ER)	Enhancer of rudimentary	Enhancer of rudimentary is a protein of unknown function that is highly conserved in plants and animals. This protein is found to be an enhancer of the rudimentary gene Swiss:P05990.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, D	Scaffold attachment factor B2	DNA binding binding nucleic acid binding RNA binding identical protein binding protein binding	cellular response to stimulus regulation of cellular process intracellular receptor signaling pathway response to stimulus response to lipid signaling regulation of signal transduction hormone-mediated signaling pathway intracellular signal transduction cell communication cellular response to endogenous stimulus response to hormone regulation of intracellular signal transduction response to steroid hormone regulation of intracellular steroid hormone receptor signaling pathway cellular response to stimulus regulation of cellular process intracellular receptor signaling pathway response to stimulus response to lipid signaling regulation of signal transduction hormone-mediated signaling pathway intracellular signal transduction cell communication cellular response to endogenous stimulus response to hormone regulation of intracellular signal transduction response to steroid hormone regulation of intracellular steroid hormone receptor signaling pathway signal transduction androgen receptor signaling pathway nuclear receptor-mediated steroid hormone signaling pathway cellular response to steroid hormone stimulus steroid hormone receptor signaling pathway cellular response to hormone stimulus regulation of biological process regulation of signaling response to endogenous stimulus biological regulation regulation of androgen receptor signaling pathway cellular response to chemical stimulus regulation of response to stimulus response to chemical cellular response to lipid regulation of cell communication cellular process nuclear receptor-mediated signaling pathway RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process macromolecule metabolic process	extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm nucleus membrane-enclosed lumen intracellular membraneless organelle extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear body intracellular organelle nucleoplasm organelle lumen membraneless organelle nuclear lumen
A, B	Enhancer of rudimentary homolog	sequence-specific DNA binding DNA binding binding nucleoside phosphate binding nucleotide binding nucleic acid binding heterocyclic compound binding methyl-CpG binding small molecule binding RNA binding	nucleobase-containing compound metabolic process primary metabolic process metabolic process cellular process pyrimidine-containing compound metabolic process nucleobase-containing small molecule metabolic process carbohydrate derivative metabolic process small molecule metabolic process pyrimidine nucleoside metabolic process nucleoside metabolic process cellular localization nitrogen compound transport nucleocytoplasmic transport transport nucleobase-containing compound metabolic process primary metabolic process metabolic process cellular process pyrimidine-containing compound metabolic process nucleobase-containing small molecule metabolic process carbohydrate derivative metabolic process small molecule metabolic process pyrimidine nucleoside metabolic process nucleoside metabolic process cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization intercellular transport mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport nucleic acid transport intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization macromolecule metabolic process	midbody cellular anatomical structure protein-containing complex intracellular anatomical structure catalytic complex methylosome methyltransferase complex cytoplasm transferase complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, D	IPR000504	RNA recognition motif domain	Domain
C, D	IPR034781	Scaffold attachment factor B1/2, RNA binding domain	Domain
C, D	IPR051738	Scaffold Attachment Factor and Modulators	Family
C, D	IPR003034	SAP domain	Domain
C, D	IPR036361	SAP domain superfamily	Homologous Superfamily
C, D	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
C, D	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
A, B	IPR035912	Enhancer of rudimentary superfamily	Homologous Superfamily
A, B	IPR000781	Enhancer of rudimentary	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C, D	: Q14151	astrocytic tumor ovarian cancer dermatomyositis plasma cell myeloma large cell medulloblastoma
A, B	: P84090	diabetes mellitus osteosarcoma lymphoplasmacytic lymphoma pancreatic ductal adenocarcinoma MALT lymphoma plasma cell myeloma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.