9RDK | pdb_00009rdk

Cryo-EM structure of the human SAGA co-activator complex


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth L]TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
Transcription initiation protein SPT3 homolog
Transcription initiation factor TFIID subunit 10
Transcription initiation factor TFIID subunit 12
F [auth D]STAGA complex 65 subunit gamma
E [auth C]Transformation/transcription domain-associated protein
D [auth A]Splicing factor 3B subunit 3
B [auth N]Ataxin-7-
M [auth B]Splicing factor 3B subunit 5
L [auth M]Transcription factor SPT20 homolog
TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
Transcriptional adapter 1
A [auth E]Transcription initiation factor TFIID subunit 9B

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth L]IPR007582TFIID subunit TAF5, NTD2 domainDomain
C [auth L]IPR019775WD40 repeat, conserved siteConserved Site
C [auth L]IPR037264TFIID subunit TAF5, NTD2 domain superfamilyHomologous Superfamily
C [auth L]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
C [auth L]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
C [auth L]IPR001680WD40 repeatRepeat
C [auth L]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR009072Histone-foldHomologous Superfamily
IPR003195Transcription initiation factor IID, subunit 13Family
IPR003923Transcription initiation factor TFIID, subunit 10Family
IPR009072Histone-foldHomologous Superfamily
IPR037794Transcription initiation factor TFIID subunit 12Family
IPR003228Transcription initiation factor TFIID subunit 12 domainDomain
F [auth D]IPR009072Histone-foldHomologous Superfamily
F [auth D]IPR006565Bromodomain associated domainDomain
F [auth D]IPR039460STAGA complex 65 subunit gamma/SAGA complex subunit Spt7Family
E [auth C]IPR016024Armadillo-type foldHomologous Superfamily
E [auth C]IPR003152FATC domainDomain
E [auth C]IPR011989Armadillo-like helicalHomologous Superfamily
E [auth C]IPR046805Tra1, HEAT repeat ring regionRepeat
E [auth C]IPR000403Phosphatidylinositol 3-/4-kinase, catalytic domainDomain
E [auth C]IPR046807Tra1, HEAT repeat central regionRepeat
E [auth C]IPR050517DNA Damage Response and Repair KinaseFamily
E [auth C]IPR003151PIK-related kinase, FATDomain
E [auth C]IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
E [auth C]IPR014009PIK-related kinase, FAT domainDomain
D [auth A]IPR050358RSE1/DDB1/CPSF1Family
D [auth A]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
D [auth A]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
D [auth A]IPR018846RSE1/DDB1/CPSF1, first beta-propellerDomain
D [auth A]IPR058543RSE1/DDB1/CPSF1, second beta-propellerDomain
D [auth A]IPR004871RSE1/DDB1/CPSF1, C-terminalDomain
B [auth N]IPR013243SCA7 domainDomain
B [auth N]IPR052237Ataxin-7-like transcription regulatorFamily
M [auth B]IPR017089Splicing factor 3B, subunit 5Family
M [auth B]IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10Family
L [auth M]IPR021950Transcription factor Spt20Family
L [auth M]IPR046468Spt20-like, SEP domainDomain
IPR009072Histone-foldHomologous Superfamily
IPR011442TAF6, C-terminal HEAT repeat domainDomain
IPR037796Transcription initiation factor TFIID subunit 6Family
IPR046344TAF6, C-terminal HEAT repeat domain superfamilyHomologous Superfamily
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
IPR024738Transcriptional coactivator Hfi1/Transcriptional adapter 1Family
A [auth E]IPR009072Histone-foldHomologous Superfamily
A [auth E]IPR003162Transcription initiation factor TAFII31Family
A [auth E]IPR051431Transcription initiation factor TFIID subunit 9/TAF9Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth L]PharosO75529
PharosO75486
PharosQ12962
PharosQ16514
F [auth D]PharosO94864
E [auth C]PharosQ9Y4A5
D [auth A]PharosQ15393
B [auth N]PharosO15265
M [auth B]PharosQ9BWJ5
L [auth M]PharosQ8NEM7
PharosQ9Y6J9
PharosQ96BN2
A [auth E]PharosQ9HBM6