9R6N | pdb_00009r6n

Crystal structure of ALDH1A2 in complex with KyA33

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	ALDH-like	8065572	3001479	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ALDH-like	8065572	3001479	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	ALDH-like	8065572	3001479	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	ALDH-like	8065572	3001479	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Integrase_Zn	e9r6nD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Integrase_Zn	ECOD (v295.2)
C	IBR	e9r6nC1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: IBR	ECOD (v295.2)
B	IBR	e9r6nB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: IBR	ECOD (v295.2)
A	IBR	e9r6nA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: IBR	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00171	Aldehyde dehydrogenase family (Aldedh)	Aldehyde dehydrogenase family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Retinal dehydrogenase 2	vitamin binding binding retinal binding isoprenoid binding retinoid binding lipid binding small molecule binding oxidoreductase activity aldehyde dehydrogenase (NAD+) activity oxidoreductase activity, acting on the aldehyde or oxo group of donors retinal dehydrogenase (NAD+) activity catalytic activity aldehyde dehydrogenase [NAD(P)+] activity oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor vitamin binding binding retinal binding isoprenoid binding retinoid binding lipid binding small molecule binding oxidoreductase activity aldehyde dehydrogenase (NAD+) activity oxidoreductase activity, acting on the aldehyde or oxo group of donors retinal dehydrogenase (NAD+) activity catalytic activity aldehyde dehydrogenase [NAD(P)+] activity oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 3-chloroallyl aldehyde dehydrogenase activity	developmental process multicellular organism development multicellular organismal process hepaticobiliary system development gland development animal organ development anatomical structure development liver development animal gross anatomical part developmental process system development digestive system development tube development midgut development digestive tract development developmental process multicellular organism development multicellular organismal process hepaticobiliary system development gland development animal organ development anatomical structure development liver development animal gross anatomical part developmental process system development digestive system development tube development midgut development digestive tract development diterpenoid metabolic process oxoacid metabolic process regulation of hormone levels biological regulation carboxylic acid metabolic process primary metabolic process hormone metabolic process retinoic acid metabolic process retinoid metabolic process metabolic process cellular process small molecule metabolic process regulation of biological quality monocarboxylic acid metabolic process terpenoid metabolic process isoprenoid metabolic process lipid metabolic process aldehyde metabolic process protein-containing complex organization protein homotetramerization cellular component organization cellular component biogenesis cellular component assembly protein complex oligomerization protein tetramerization protein-containing complex assembly protein homooligomerization cellular component organization or biogenesis response to nutrient levels response to stimulus response to lipid response to chemical response to nutrient response to vitamin A response to vitamin cellular response to stimulus response to oxygen-containing compound cellular response to oxygen-containing compound response to retinoic acid cellular response to chemical stimulus cellular response to retinoic acid cellular response to lipid lipid biosynthetic process terpenoid biosynthetic process carboxylic acid biosynthetic process monocarboxylic acid biosynthetic process small molecule biosynthetic process isoprenoid biosynthetic process diterpenoid biosynthetic process retinoic acid biosynthetic process biosynthetic process response to peptide response to cytokine head development forebrain development endocrine system development pituitary gland development brain development diencephalon development nervous system development central nervous system development negative regulation of cell population proliferation regulation of biological process cell population proliferation regulation of cellular process regulation of cell population proliferation negative regulation of cellular process negative regulation of biological process epithelium development neural tube development chordate embryonic development embryo development tissue development embryo development ending in birth or egg hatching vitamin A metabolic process kidney development renal system development response to estradiol alcohol metabolic process olefinic compound metabolic process retinol metabolic process primary alcohol metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol perinuclear region of cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR015590	Aldehyde dehydrogenase domain	Domain
A, B, C, D	IPR016161	Aldehyde/histidinol dehydrogenase	Homologous Superfamily
A, B, C, D	IPR029510	Aldehyde dehydrogenase, glutamic acid active site	Conserved Site
A, B, C, D	IPR016160	Aldehyde dehydrogenase, cysteine active site	Conserved Site
A, B, C, D	IPR016162	Aldehyde dehydrogenase, N-terminal	Homologous Superfamily
A, B, C, D	IPR016163	Aldehyde dehydrogenase, C-terminal	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D	: O94788	osteoarthritis myelomeningocele Barrett esophagus prostate cancer medulloblastoma Myelocele oligodendroglioma parkinsonian disorder Crohn disease schizophrenia esophageal adenocarcinoma invasive ductal breast carcinoma malignant ependymoma ovarian cancer age-related macular degeneration osteoarthritis myelomeningocele Barrett esophagus prostate cancer medulloblastoma Myelocele oligodendroglioma parkinsonian disorder Crohn disease schizophrenia esophageal adenocarcinoma invasive ductal breast carcinoma malignant ependymoma ovarian cancer age-related macular degeneration pituitary cancer psoriasis cystic fibrosis ulcerative colitis large cell medulloblastoma malignant glioma metabolic syndrome X non-small cell lung carcinoma osteoarthritis susceptibility 1 pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia atopic eczema autosomal recessive juvenile Parkinson disease 2 breast carcinoma ductal breast carcinoma in situ wet macular degeneration interstitial cystitis lung cancer

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.