9QF6 | pdb_00009qf6

Structure of P. furiosus 70S ribosome in RsmB deleted strain


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth Ah]SCOP2B SuperfamilyRibosomal protein S7 8065991 3000799 SCOP2B (2022-06-29)
H [auth Ag]SCOP2B SuperfamilyGS N-terminal domain-like 8053162 3000408 SCOP2B (2022-06-29)
LB [auth Bj]SCOP2B SuperfamilyRplX-like 8100270 3000673 SCOP2B (2022-06-29)
KB [auth Bi]SCOP2B SuperfamilyZn-binding ribosomal proteins 8100272 3001320 SCOP2B (2022-06-29)
F [auth Ae]SCOP2B SuperfamilyNucleic acid-binding proteins 8052753 3000135 SCOP2B (2022-06-29)
F [auth Ae]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052754 3000334 SCOP2B (2022-06-29)
F [auth Ae]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052752 3001473 SCOP2B (2022-06-29)
HB [auth Bf]SCOP2B SuperfamilyRibosomal protein L39e 8100266 3001756 SCOP2B (2022-06-29)
GB [auth Be]SCOP2B SuperfamilyZn-binding ribosomal proteins 8100256 3001320 SCOP2B (2022-06-29)
FB [auth Bd]SCOP2B SuperfamilyZn-binding ribosomal proteins 8100264 3001320 SCOP2B (2022-06-29)
EB [auth Bc]SCOP2B SuperfamilyTranslational proteins 8042350 3000811 SCOP2B (2022-06-29)
DB [auth Bb]SCOP2B SuperfamilyRibosomal protein L34e-like 8053545 3002203 SCOP2B (2022-06-29)
CB [auth Ba]SCOP2B SuperfamilyRibosomal protein L32e 8100508 3000982 SCOP2B (2022-06-29)
BB [auth BZ]SCOP2B SuperfamilyRibosomal protein L31e 8100268 3000699 SCOP2B (2022-06-29)
AB [auth BY]SCOP2B SuperfamilyL30e-like 8063968 3001739 SCOP2B (2022-06-29)
ZA [auth BX]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8077497 3001378 SCOP2B (2022-06-29)
YA [auth BW]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8076740 3000713 SCOP2B (2022-06-29)
WA [auth BU]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076746 3000334 SCOP2B (2022-06-29)
VA [auth BT]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8077077 3000210 SCOP2B (2022-06-29)
UA [auth BS]SCOP2B SuperfamilyRibosomal protein L22 8076700 3001078 SCOP2B (2022-06-29)
TA [auth BR]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8077105 3000334 SCOP2B (2022-06-29)
SA [auth BQ]SCOP2B SuperfamilyRibosomal protein L19 (L19e) 8077465 3000890 SCOP2B (2022-06-29)
RA [auth BP]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095969 3001045 SCOP2B (2022-06-29)
QA [auth BO]SCOP2B SuperfamilyTranslational machinery components 8052874 3000571 SCOP2B (2022-06-29)
PA [auth BN]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082471 3000210 SCOP2B (2022-06-29)
D [auth Ac]SCOP2B SuperfamilyRibosomal S3Ae-like 8053209 3002166 SCOP2B (2022-06-29)
OA [auth BM]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8077121 3001045 SCOP2B (2022-06-29)
LA [auth BJ]SCOP2B Superfamily50S Ribosomal protein L14-like 8072038 3000433 SCOP2B (2022-06-29)
KA [auth BI]SCOP2B SuperfamilyRibosomal protein L13 8066051 3001134 SCOP2B (2022-06-29)
JA [auth BH]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8079409 3000884 SCOP2B (2022-06-29)
IA [auth BG]SCOP2B SuperfamilyL30e-like 8033057 3001739 SCOP2B (2022-06-29)
HA [auth BF]SCOP2B SuperfamilyL30e-like 8033057 3001739 SCOP2B (2022-06-29)
FA [auth BD]SCOP2B SuperfamilyRL5-like 8077501 3001709 SCOP2B (2022-06-29)
EA [auth BC]SCOP2B SuperfamilyRibosomal protein L4 8077107 3001146 SCOP2B (2022-06-29)
DA [auth BB]SCOP2B SuperfamilyTranslational proteins 8078347 3000811 SCOP2B (2022-06-29)
X [auth Aw]SCOP2B SuperfamilyZn-binding ribosomal proteins 8063782 3001320 SCOP2B (2022-06-29)
NB [auth Bl]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082571 3000210 SCOP2B (2022-06-29)
W [auth Av]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082571 3000210 SCOP2B (2022-06-29)
T [auth As]SCOP2B SuperfamilyRps17e-like 8063510 3001852 SCOP2B (2022-06-29)
B [auth Aa]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063808 3001397 SCOP2B (2022-06-29)
R [auth Aq]SCOP2B SuperfamilyHomeodomain-like 8052955 3000001 SCOP2B (2022-06-29)
R [auth Aq]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052956 3001284 SCOP2B (2022-06-29)
Q [auth Ap]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052588 3000068 SCOP2B (2022-06-29)
P [auth Ao]SCOP2B SuperfamilyS13-like H2TH domain 8100260 3000053 SCOP2B (2022-06-29)
N [auth Am]SCOP2B SuperfamilyTranslational machinery components 8100262 3000571 SCOP2B (2022-06-29)
M [auth Al]SCOP2B SuperfamilyRibosomal protein S10 8098822 3001336 SCOP2B (2022-06-29)
L [auth Ak]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082675 3000100 SCOP2B (2022-06-29)
K [auth Aj]SCOP2B Superfamily50S Ribosomal protein L14-like 8053085 3000433 SCOP2B (2022-06-29)
J [auth Ai]SCOP2B SuperfamilyRibosomal protein S8 8079067 3000709 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
BB [auth BZ]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
ZA [auth BX]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
YA [auth BW]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
XA [auth BV]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
WA [auth BU]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
WA [auth BU]PF00467KOW motif (KOW)KOW motif- Family
VA [auth BT]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
UA [auth BS]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
TA [auth BR]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
SA [auth BQ]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
RA [auth BP]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
QA [auth BO]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
PA [auth BN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
OA [auth BM]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
MA [auth BK],
NA [auth BL]
PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
MA [auth BK],
NA [auth BL]
PF00096Zinc finger, C2H2 type (zf-C2H2)Zinc finger, C2H2 typeThe C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, an ...The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [2].
Domain
MA [auth BK],
NA [auth BL]
PF00467KOW motif (KOW)KOW motif- Family
LA [auth BJ]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
LA [auth BJ]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
KA [auth BI]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
KA [auth BI]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
JA [auth BH]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
HA [auth BF],
IA [auth BG]
PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
HA [auth BF],
IA [auth BG]
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
GA [auth BE]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
GA [auth BE]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
FA [auth BD]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
FA [auth BD]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
FA [auth BD]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
EA [auth BC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
DA [auth BB]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
CA [auth BA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
CA [auth BA]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
CA [auth BA]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth Ah]Small ribosomal subunit protein uS7
H [auth Ag]Small ribosomal subunit protein eS6
G [auth Af]Small ribosomal subunit protein uS5
MB [auth Bk]C2H2-type domain-containing protein- - -
LB [auth Bj]Large ribosomal subunit protein eL20
KB [auth Bi]Large ribosomal subunit protein eL42
JB [auth Bh]Small ribosomal subunit protein eS32- -
F [auth Ae]Small ribosomal subunit protein eS4
IB [auth Bg]Large ribosomal subunit protein eL40
HB [auth Bf]Large ribosomal subunit protein eL39
GB [auth Be]Large ribosomal subunit protein eL43
FB [auth Bd]Large ribosomal subunit protein eL37
EB [auth Bc]Large ribosomal subunit protein eL33
DB [auth Bb]Large ribosomal subunit protein eL34
CB [auth Ba]Large ribosomal subunit protein eL32
BB [auth BZ]Large ribosomal subunit protein eL31
AB [auth BY]Large ribosomal subunit protein eL30
ZA [auth BX]Large ribosomal subunit protein uL30
E [auth Ad]Small ribosomal subunit protein uS4
YA [auth BW]Large ribosomal subunit protein uL29
XA [auth BV]Large ribosomal subunit protein eL24
WA [auth BU]Large ribosomal subunit protein uL24
VA [auth BT]Large ribosomal subunit protein uL23
UA [auth BS]Large ribosomal subunit protein uL22
TA [auth BR]Large ribosomal subunit protein eL21
SA [auth BQ]Large ribosomal subunit protein eL19
RA [auth BP]Large ribosomal subunit protein eL18
QA [auth BO]Large ribosomal subunit protein uL18
PA [auth BN]Large ribosomal subunit protein eL15
D [auth Ac]Small ribosomal subunit protein eS1
OA [auth BM]Large ribosomal subunit protein uL15
MA [auth BK],
NA [auth BL]
Large ribosomal subunit protein eL14
LA [auth BJ]Large ribosomal subunit protein uL14
KA [auth BI]Large ribosomal subunit protein uL13
JA [auth BH]Large ribosomal subunit protein uL16
HA [auth BF],
IA [auth BG]
Large ribosomal subunit protein eL8
GA [auth BE]Large ribosomal subunit protein uL6
FA [auth BD]Large ribosomal subunit protein uL5
EA [auth BC]Large ribosomal subunit protein uL4
DA [auth BB]Large ribosomal subunit protein uL3
C [auth Ab]Small ribosomal subunit protein uS3
CA [auth BA]Large ribosomal subunit protein uL2
BA [auth B2]5S rRNA---
AA [auth B1]23S rRNA---
Z [auth Az]Zn-ribbon RNA-binding protein- - -
Y [auth Ax]Small ribosomal subunit protein eS28
X [auth Aw]Small ribosomal subunit protein eS27
NB [auth Bl],
W [auth Av]
Small ribosomal subunit protein eS24
V [auth Au]Small ribosomal subunit protein eS19
U [auth At]Small ribosomal subunit protein uS19
T [auth As]Small ribosomal subunit protein eS17
B [auth Aa]Small ribosomal subunit protein uS2
S [auth Ar]Small ribosomal subunit protein uS17
R [auth Aq]Small ribosomal subunit protein uS15
Q [auth Ap]Small ribosomal subunit protein uS14
P [auth Ao]Small ribosomal subunit protein uS13
O [auth An]Small ribosomal subunit protein uS12
N [auth Am]Small ribosomal subunit protein uS11
M [auth Al]Small ribosomal subunit protein uS10
L [auth Ak]Small ribosomal subunit protein uS9
K [auth Aj]Small ribosomal subunit protein eS8
J [auth Ai]Small ribosomal subunit protein uS8
A [auth A1]16S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth Ah]IPR000235Small ribosomal subunit protein uS7Family
I [auth Ah]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
I [auth Ah]IPR026018Small ribosomal subunit protein uS7, archaeaFamily
I [auth Ah]IPR023798Small ribosomal subunit protein uS7 domainDomain
I [auth Ah]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
H [auth Ag]IPR001377Small ribosomal subunit protein eS6Family
H [auth Ag]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
H [auth Ag]IPR020924Small ribosomal subunit protein eS6, archaeaFamily
G [auth Af]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
G [auth Af]IPR000851Small ribosomal subunit protein uS5Family
G [auth Af]IPR047866Small ribosomal subunit protein uS5, archaeaFamily
G [auth Af]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
G [auth Af]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
G [auth Af]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
G [auth Af]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
G [auth Af]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
MB [auth Bk]IPR013087Zinc finger C2H2-typeDomain
LB [auth Bj]IPR028877Large ribosomal subunit protein eL20Family
LB [auth Bj]IPR023573Large ribosomal subunit protein eL20 domainDomain
KB [auth Bi]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
KB [auth Bi]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
KB [auth Bi]IPR000552Large ribosomal subunit protein eL42Family
F [auth Ae]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
F [auth Ae]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
F [auth Ae]IPR002942RNA-binding S4 domainDomain
F [auth Ae]IPR013845Small ribosomal subunit protein eS4, central regionDomain
F [auth Ae]IPR000876Small ribosomal subunit protein eS4Family
F [auth Ae]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth Ae]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
F [auth Ae]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
F [auth Ae]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
F [auth Ae]IPR005824KOWDomain
IB [auth Bg]IPR023657Large ribosomal subunit protein eL40, archaeaFamily
IB [auth Bg]IPR001975Large ribosomal subunit protein eL40 domainDomain
IB [auth Bg]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
IB [auth Bg]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HB [auth Bf]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
HB [auth Bf]IPR000077Large ribosomal subunit protein eL39Family
HB [auth Bf]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
GB [auth Be]IPR002674Large ribosomal subunit protein eL43Family
GB [auth Be]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GB [auth Be]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
GB [auth Be]IPR050522Eukaryotic ribosomal protein eL43Family
FB [auth Bd]IPR001569Large ribosomal subunit protein eL37Family
FB [auth Bd]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
FB [auth Bd]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FB [auth Bd]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
EB [auth Bc]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
EB [auth Bc]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EB [auth Bc]IPR001780Large ribosomal subunit protein eL33Family
EB [auth Bc]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
DB [auth Bb]IPR008195Large ribosomal subunit protein eL34Family
DB [auth Bb]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
DB [auth Bb]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
DB [auth Bb]IPR047868Large ribosomal subunit protein eL34, eukaryota/archaeaFamily
CB [auth Ba]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
CB [auth Ba]IPR023654Large ribosomal subunit protein eL32, archaeaFamily
CB [auth Ba]IPR001515Large ribosomal subunit protein eL32Family
CB [auth Ba]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
BB [auth BZ]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
BB [auth BZ]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
BB [auth BZ]IPR000054Large ribosomal subunit protein eL31Family
AB [auth BY]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
AB [auth BY]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
AB [auth BY]IPR000231Large ribosomal subunit protein eL30Family
AB [auth BY]IPR039109Large ribosomal subunit protein eL30-likeFamily
AB [auth BY]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
ZA [auth BX]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
ZA [auth BX]IPR039699Large ribosomal subunit protein uL30Family
ZA [auth BX]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
ZA [auth BX]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
ZA [auth BX]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
ZA [auth BX]IPR005997Large ribosomal subunit protein uL30, archaeaFamily
E [auth Ad]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
E [auth Ad]IPR002942RNA-binding S4 domainDomain
E [auth Ad]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
E [auth Ad]IPR022802Small ribosomal subunit protein uS4, archaeaFamily
E [auth Ad]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
E [auth Ad]IPR022801Small ribosomal subunit protein uS4Family
E [auth Ad]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
YA [auth BW]IPR001854Large ribosomal subunit protein uL29Family
YA [auth BW]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
YA [auth BW]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
XA [auth BV]IPR011017TRASH domainDomain
XA [auth BV]IPR056366Large ribosomal subunit protein eL24Family
XA [auth BV]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
XA [auth BV]IPR055345Large ribosomal subunit protein eL24-like, archaeaFamily
XA [auth BV]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
XA [auth BV]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
WA [auth BU]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
WA [auth BU]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
WA [auth BU]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
WA [auth BU]IPR005824KOWDomain
WA [auth BU]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
WA [auth BU]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
VA [auth BT]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
VA [auth BT]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
VA [auth BT]IPR019985Large ribosomal subunit protein uL23Family
VA [auth BT]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
VA [auth BT]IPR013025Large ribosomal subunit protein uL23-likeFamily
UA [auth BS]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
UA [auth BS]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
UA [auth BS]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
UA [auth BS]IPR001063Large ribosomal subunit protein uL22Family
TA [auth BR]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
TA [auth BR]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
TA [auth BR]IPR022856Large ribosomal subunit protein eL21, archaeaFamily
TA [auth BR]IPR001147Large ribosomal subunit protein eL21Family
TA [auth BR]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
SA [auth BQ]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
SA [auth BQ]IPR039547Large ribosomal subunit protein eL19Family
SA [auth BQ]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
SA [auth BQ]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
SA [auth BQ]IPR000196Large ribosomal subunit protein eL19 domainDomain
SA [auth BQ]IPR033936Large ribosomal subunit protein eL19, archaeaDomain
RA [auth BP]IPR022947Large ribosomal subunit protein eL18, archaeaFamily
RA [auth BP]IPR021131Large ribosomal subunit protein uL15/eL18Domain
RA [auth BP]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
RA [auth BP]IPR000039Large ribosomal subunit protein eL18Family
RA [auth BP]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
QA [auth BO]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
PA [auth BN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
PA [auth BN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
PA [auth BN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
PA [auth BN]IPR020926Large ribosomal subunit protein eL15, archaealFamily
PA [auth BN]IPR000439Large ribosomal subunit protein eL15Family
D [auth Ac]IPR001593Small ribosomal subunit protein eS1Family
D [auth Ac]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
D [auth Ac]IPR030838Small ribosomal subunit protein eS1, archaeaFamily
OA [auth BM]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
OA [auth BM]IPR021131Large ribosomal subunit protein uL15/eL18Domain
OA [auth BM]IPR030878Large ribosomal subunit protein uL15Family
OA [auth BM]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
OA [auth BM]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
MA [auth BK],
NA [auth BL]
IPR039660Large ribosomal subunit protein eL14Family
MA [auth BK],
NA [auth BL]
IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
MA [auth BK],
NA [auth BL]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth BK],
NA [auth BL]
IPR005824KOWDomain
MA [auth BK],
NA [auth BL]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth BK],
NA [auth BL]
IPR023651Large ribosomal subunit protein eL14, archaeaFamily
LA [auth BJ]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
LA [auth BJ]IPR000218Large ribosomal subunit protein uL14Family
LA [auth BJ]IPR019971Large ribosomal subunit protein uL14, archaeaFamily
LA [auth BJ]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
KA [auth BI]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
KA [auth BI]IPR005822Large ribosomal subunit protein uL13Family
KA [auth BI]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
KA [auth BI]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
KA [auth BI]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
JA [auth BH]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
JA [auth BH]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
JA [auth BH]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
JA [auth BH]IPR022981Large ribosomal subunit protein uL16, archaeaFamily
JA [auth BH]IPR016180Large ribosomal subunit protein uL16 domainDomain
JA [auth BH]IPR047873Large ribosomal subunit protein uL16Family
HA [auth BF],
IA [auth BG]
IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
HA [auth BF],
IA [auth BG]
IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
HA [auth BF],
IA [auth BG]
IPR022481Large ribosomal subunit protein eL8, archaeaFamily
HA [auth BF],
IA [auth BG]
IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
HA [auth BF],
IA [auth BG]
IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
HA [auth BF],
IA [auth BG]
IPR018492Ribosomal protein eL8/Nhp2 familyFamily
GA [auth BE]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
GA [auth BE]IPR019907Large ribosomal subunit protein uL6, archaeaFamily
GA [auth BE]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
GA [auth BE]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
GA [auth BE]IPR000702Large ribosomal subunit protein uL6-likeFamily
FA [auth BD]IPR022804Large ribosomal subunit protein uL5, archaeaFamily
FA [auth BD]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
FA [auth BD]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
FA [auth BD]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
FA [auth BD]IPR002132Large ribosomal subunit protein uL5Family
EA [auth BC]IPR019970Large ribosomal subunit protein uL4, archaeaFamily
EA [auth BC]IPR002136Large ribosomal subunit protein uL4Family
EA [auth BC]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
EA [auth BC]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
EA [auth BC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
DA [auth BB]IPR019928Large ribosomal subunit protein uL3, archaeaFamily
DA [auth BB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
DA [auth BB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DA [auth BB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
DA [auth BB]IPR000597Large ribosomal subunit protein uL3Family
DA [auth BB]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
C [auth Ab]IPR004087K Homology domainDomain
C [auth Ab]IPR004044K Homology domain, type 2Domain
C [auth Ab]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
C [auth Ab]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth Ab]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth Ab]IPR027488Small ribosomal subunit protein uS3, archaeaFamily
C [auth Ab]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth Ab]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
CA [auth BA]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
CA [auth BA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
CA [auth BA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth BA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CA [auth BA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
CA [auth BA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth BA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
CA [auth BA]IPR002171Large ribosomal subunit protein uL2Family
Z [auth Az]IPR011668Ribosomal protein aS21, zinc-binding pocketDomain
Z [auth Az]IPR044720Zinc finger protein HVO_2753-likeFamily
Y [auth Ax]IPR028626Ribosomal protein eS28 conserved siteConserved Site
Y [auth Ax]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Y [auth Ax]IPR000289Small ribosomal subunit protein eS28Family
X [auth Aw]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
X [auth Aw]IPR000592Small ribosomal subunit protein eS27Family
X [auth Aw]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
NB [auth Bl],
W [auth Av]
IPR001976Small ribosomal subunit protein eS24Family
NB [auth Bl],
W [auth Av]
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
NB [auth Bl],
W [auth Av]
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
NB [auth Bl],
W [auth Av]
IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
V [auth Au]IPR001266Small ribosomal subunit protein eS19Family
V [auth Au]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
V [auth Au]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
V [auth Au]IPR027548Small ribosomal subunit protein eS19, archaeaFamily
V [auth Au]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
U [auth At]IPR002222Small ribosomal subunit protein uS19Family
U [auth At]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
U [auth At]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
U [auth At]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
T [auth As]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
T [auth As]IPR001210Small ribosomal subunit protein eS17Family
T [auth As]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
B [auth Aa]IPR023454Small ribosomal subunit protein uS2, archaeaFamily
B [auth Aa]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth Aa]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth Aa]IPR001865Small ribosomal subunit protein uS2Family
B [auth Aa]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
S [auth Ar]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
S [auth Ar]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
S [auth Ar]IPR000266Small ribosomal subunit protein uS17Family
S [auth Ar]IPR019978Small ribosomal subunit protein uS17, archaealFamily
S [auth Ar]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
R [auth Aq]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
R [auth Aq]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
R [auth Aq]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
R [auth Aq]IPR000589Small ribosomal subunit protein uS15Family
Q [auth Ap]IPR001209Small ribosomal subunit protein uS14Family
Q [auth Ap]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
Q [auth Ap]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
Q [auth Ap]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
Q [auth Ap]IPR023676Small ribosomal subunit protein uS14, archaeaFamily
P [auth Ao]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
P [auth Ao]IPR001892Small ribosomal subunit protein uS13Family
P [auth Ao]IPR019977Small ribosomal subunit protein uS13, archaeaFamily
P [auth Ao]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
P [auth Ao]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
O [auth An]IPR006032Small ribosomal subunit protein uS12Family
O [auth An]IPR022863Ribosomal protein uS12, archaeaFamily
O [auth An]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
O [auth An]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
N [auth Am]IPR019961Small ribosomal subunit protein uS11, archaeaFamily
N [auth Am]IPR001971Small ribosomal subunit protein uS11Family
N [auth Am]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
N [auth Am]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
M [auth Al]IPR001848Small ribosomal subunit protein uS10Family
M [auth Al]IPR027486Small ribosomal subunit protein uS10 domainDomain
M [auth Al]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
M [auth Al]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
M [auth Al]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
L [auth Ak]IPR019958Small ribosomal subunit protein uS9, archaeaFamily
L [auth Ak]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
L [auth Ak]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
L [auth Ak]IPR000754Small ribosomal subunit protein uS9Family
L [auth Ak]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
K [auth Aj]IPR001047Small ribosomal subunit protein eS8Family
K [auth Aj]IPR020919Small ribosomal subunit protein eS8, archaeaFamily
K [auth Aj]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
K [auth Aj]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
J [auth Ai]IPR000630Small ribosomal subunit protein uS8Family
J [auth Ai]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
J [auth Ai]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily