9Q9F | pdb_00009q9f

DNA-PK bound to a 153 bp H2AX nucleosome model 1


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth B],
M [auth F]
Histone H4
H [auth A],
L [auth E]
Histone H3.1
G [auth D],
K [auth H]
Histone H2B type 1-J
F [auth C],
J [auth G]
Histone H2AX
E [auth O]DNA-dependent protein kinase catalytic subunit
D [auth J]DNA---
C [auth I]DNA---
B [auth L]X-ray repair cross-complementing protein 5
A [auth K]X-ray repair cross-complementing protein 6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth B],
M [auth F]
IPR009072Histone-foldHomologous Superfamily
I [auth B],
M [auth F]
IPR035425CENP-T/Histone H4, histone foldDomain
I [auth B],
M [auth F]
IPR001951Histone H4Family
I [auth B],
M [auth F]
IPR019809Histone H4, conserved siteConserved Site
I [auth B],
M [auth F]
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
H [auth A],
L [auth E]
IPR009072Histone-foldHomologous Superfamily
H [auth A],
L [auth E]
IPR007125Core Histone H2A/H2B/H3 domainDomain
H [auth A],
L [auth E]
IPR000164Histone H3/CENP-AFamily
G [auth D],
K [auth H]
IPR009072Histone-foldHomologous Superfamily
G [auth D],
K [auth H]
IPR000558Histone H2BFamily
G [auth D],
K [auth H]
IPR007125Core Histone H2A/H2B/H3 domainDomain
G [auth D],
K [auth H]
IPR055333Histone H2B, conserved siteConserved Site
F [auth C],
J [auth G]
IPR002119Histone H2AFamily
F [auth C],
J [auth G]
IPR007125Core Histone H2A/H2B/H3 domainDomain
F [auth C],
J [auth G]
IPR032454Histone H2A, C-terminal domainDomain
F [auth C],
J [auth G]
IPR032458Histone H2A conserved siteConserved Site
F [auth C],
J [auth G]
IPR009072Histone-foldHomologous Superfamily
E [auth O]IPR016024Armadillo-type foldHomologous Superfamily
E [auth O]IPR003151PIK-related kinase, FATDomain
E [auth O]IPR046803DNA-dependent protein kinase catalytic subunit, CC1/2Domain
E [auth O]IPR046804DNA-PKcs, N-terminalDomain
E [auth O]IPR045581DNA-dependent protein kinase catalytic subunit, CC5Domain
E [auth O]IPR003152FATC domainDomain
E [auth O]IPR012582DNA-dependent protein kinase catalytic subunit, CC3Domain
E [auth O]IPR011989Armadillo-like helicalHomologous Superfamily
E [auth O]IPR000403Phosphatidylinositol 3-/4-kinase, catalytic domainDomain
E [auth O]IPR050517DNA Damage Response and Repair KinaseFamily
E [auth O]IPR018936Phosphatidylinositol 3-/4-kinase, conserved siteConserved Site
E [auth O]IPR036940Phosphatidylinositol 3-/4-kinase, catalytic domain superfamilyHomologous Superfamily
E [auth O]IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
E [auth O]IPR037706DNA-dependent protein kinase catalytic subunit, catalytic domainDomain
E [auth O]IPR014009PIK-related kinase, FAT domainDomain
B [auth L]IPR036494Ku, C-terminal domain superfamilyHomologous Superfamily
B [auth L]IPR016194SPOC-like, C-terminal domain superfamilyHomologous Superfamily
B [auth L]IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
B [auth L]IPR002035von Willebrand factor, type ADomain
B [auth L]IPR005161Ku70/Ku80, N-terminal alpha/betaDomain
B [auth L]IPR014893Ku, C-terminalDomain
B [auth L]IPR006164Ku70/Ku80, DNA-binding domainDomain
B [auth L]IPR005160Ku70/Ku80 C-terminal armDomain
B [auth L]IPR024193Ku80Family
A [auth K]IPR016194SPOC-like, C-terminal domain superfamilyHomologous Superfamily
A [auth K]IPR027388Ku70, bridge and pillars domain superfamilyHomologous Superfamily
A [auth K]IPR036361SAP domain superfamilyHomologous Superfamily
A [auth K]IPR006165Ku70Family
A [auth K]IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
A [auth K]IPR005161Ku70/Ku80, N-terminal alpha/betaDomain
A [auth K]IPR006164Ku70/Ku80, DNA-binding domainDomain
A [auth K]IPR047087Ku70, core domainDomain
A [auth K]IPR005160Ku70/Ku80 C-terminal armDomain
A [auth K]IPR003034SAP domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
I [auth B],
M [auth F]
PharosP62805
H [auth A],
L [auth E]
PharosP68431
G [auth D],
K [auth H]
PharosP06899
F [auth C],
J [auth G]
PharosP16104
E [auth O]PharosP78527
B [auth L]PharosP13010
A [auth K]PharosP12956