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 9Q3H | pdb_00009q3h

GspB Siglec domain bound to sialyl T antigen linked to serine-FMOC

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BCofilin_ADFe9q3hB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Cofilin_ADFECOD (v295.2)
ACofilin_ADFe9q3hA1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Cofilin_ADFECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF20164GspA/SrpA SigLec-like domain (GspA_SrpA_N)GspA/SrpA SigLec-like domainThis domain is an adhesive domain that binds to sialoglycan [1]. A Thr-Arg motif conserved across homologous carbohydrate-binding adhesins that may orient the sialic acid moiety of carbohydrate ligands [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Platelet binding protein GspB- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR026465Serine-rich repeat adhesion glycoprotein, N-terminal domainDomain
A, B
IPR022263KxYKxGKxW signal peptideConserved Site
A, B
IPR044024Atypical Rib domainDomain
A, B
IPR046785SrpA-like, SigLec-like domainDomain
A, B
IPR019931LPXTG cell wall anchor motifConserved Site