GspB Siglec domain bound to sialyl T antigen linked to serine-FMOC
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | RVP | e9q3hB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| A | RVP | e9q3hA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF20164 | GspA/SrpA SigLec-like domain (GspA_SrpA_N) | GspA/SrpA SigLec-like domain | This domain is an adhesive domain that binds to sialoglycan [1]. A Thr-Arg motif conserved across homologous carbohydrate-binding adhesins that may orient the sialic acid moiety of carbohydrate ligands [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR026465 | Serine-rich repeat adhesion glycoprotein, N-terminal domain | Domain | |
| IPR022263 | KxYKxGKxW signal peptide | Conserved Site | |
| IPR044024 | Atypical Rib domain | Domain | |
| IPR046785 | SrpA-like, SigLec-like domain | Domain | |
| IPR019931 | LPXTG cell wall anchor motif | Conserved Site |














