Annotations: 9PKW

Alpha1/Beta Heteromeric Glycine receptor in the presence of 0.200 mM strychnine and 200 nM ivermectin

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E	PUF	e9pkwE1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PUF	ECOD (v295.2)
D [auth B]	SPRY	e9pkwB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: SPRY	ECOD (v295.2)
C	SPRY	e9pkwC1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: SPRY	ECOD (v295.2)
B [auth D]	SPRY	e9pkwD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: SPRY	ECOD (v295.2)
A	SPRY	e9pkwA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: SPRY	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
E	PF02932	Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)	Neurotransmitter-gated ion-channel transmembrane region	This family includes the four transmembrane helices that form the ion channel.	Domain
E	PF02931	Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)	Neurotransmitter-gated ion-channel ligand binding domain	This family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E	Glycine receptor beta subunit 2	monoatomic anion transmembrane transporter activity chloride transmembrane transporter activity gated channel activity monoatomic ion channel activity inhibitory extracellular ligand-gated monoatomic ion channel activity excitatory extracellular ligand-gated monoatomic ion channel activity ligand-gated monoatomic anion channel activity ligand-gated channel activity ligand-gated monoatomic ion channel activity extracellular ligand-gated monoatomic ion channel activity extracellularly glycine-gated ion channel activity passive transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity monoatomic anion channel activity monoatomic anion transmembrane transporter activity chloride transmembrane transporter activity gated channel activity monoatomic ion channel activity inhibitory extracellular ligand-gated monoatomic ion channel activity excitatory extracellular ligand-gated monoatomic ion channel activity ligand-gated monoatomic anion channel activity ligand-gated channel activity ligand-gated monoatomic ion channel activity extracellular ligand-gated monoatomic ion channel activity extracellularly glycine-gated ion channel activity passive transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity monoatomic anion channel activity transporter activity extracellularly glycine-gated chloride channel activity transmembrane transporter activity chloride channel activity molecular transducer activity transmembrane signaling receptor activity signaling receptor activity	localization macromolecule localization intracellular protein localization	cell periphery postsynapse cellular anatomical structure postsynaptic membrane synapse cell junction membrane plasma membrane plasma membrane region synaptic membrane somatodendritic compartment cell projection dendrite dendritic tree cell periphery postsynapse cellular anatomical structure postsynaptic membrane synapse cell junction membrane plasma membrane plasma membrane region synaptic membrane somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection intracellular anatomical structure cytoplasm
A, B [auth D], C, D [auth B]	Glycine receptor, alpha 1	transmitter-gated monoatomic ion channel activity molecular transducer activity gated channel activity monoatomic ion channel activity signaling receptor activity neurotransmitter receptor activity ligand-gated channel activity ligand-gated monoatomic ion channel activity extracellular ligand-gated monoatomic ion channel activity passive transmembrane transporter activity channel activity transmitter-gated channel activity monoatomic ion transmembrane transporter activity transporter activity transmitter-gated monoatomic ion channel activity molecular transducer activity gated channel activity monoatomic ion channel activity signaling receptor activity neurotransmitter receptor activity ligand-gated channel activity ligand-gated monoatomic ion channel activity extracellular ligand-gated monoatomic ion channel activity passive transmembrane transporter activity channel activity transmitter-gated channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity cation binding organic acid binding binding ion binding anion binding glycine binding amino acid binding carboxylic acid binding small molecule binding excitatory extracellular ligand-gated monoatomic ion channel activity extracellularly glycine-gated ion channel activity monoatomic anion transmembrane transporter activity chloride transmembrane transporter activity inhibitory extracellular ligand-gated monoatomic ion channel activity ligand-gated monoatomic anion channel activity monoatomic anion channel activity extracellularly glycine-gated chloride channel activity chloride channel activity transmembrane signaling receptor activity	response to acid chemical response to stimulus response to chemical response to amino acid developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development nervous system development animal gross anatomical part developmental process system development regulation of biological process regulation of cellular process response to acid chemical response to stimulus response to chemical response to amino acid developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development nervous system development animal gross anatomical part developmental process system development regulation of biological process regulation of cellular process regulation of developmental process cellular developmental process biological regulation regulation of cell differentiation generation of neurons neurogenesis neuron differentiation cell differentiation cellular process regulation of neuron differentiation localization transport monoatomic ion transport establishment of localization	cell periphery postsynapse cellular anatomical structure postsynaptic membrane synapse cell junction membrane plasma membrane plasma membrane region synaptic membrane somatodendritic compartment cell body perikaryon neuronal cell body cell periphery postsynapse cellular anatomical structure postsynaptic membrane synapse cell junction membrane plasma membrane plasma membrane region synaptic membrane somatodendritic compartment cell body perikaryon neuronal cell body cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E	IPR018000	Neurotransmitter-gated ion-channel, conserved site	Conserved Site
E	IPR038050	Neuronal acetylcholine receptor	Homologous Superfamily
E	IPR006202	Neurotransmitter-gated ion-channel ligand-binding domain	Domain
E	IPR036719	Neurotransmitter-gated ion-channel transmembrane domain superfamily	Homologous Superfamily
E	IPR008060	Glycine receptor beta	Family
E	IPR006029	Neurotransmitter-gated ion-channel transmembrane domain	Domain
E	IPR047029	Glycine receptor subunit beta, transmembrane domain	Domain
E	IPR036734	Neurotransmitter-gated ion-channel ligand-binding domain superfamily	Homologous Superfamily
E	IPR006201	Neurotransmitter-gated ion-channel	Family
A, B [auth D], C, D [auth B]	IPR018000	Neurotransmitter-gated ion-channel, conserved site	Conserved Site
A, B [auth D], C, D [auth B]	IPR038050	Neuronal acetylcholine receptor	Homologous Superfamily
A, B [auth D], C, D [auth B]	IPR006202	Neurotransmitter-gated ion-channel ligand-binding domain	Domain
A, B [auth D], C, D [auth B]	IPR036719	Neurotransmitter-gated ion-channel transmembrane domain superfamily	Homologous Superfamily
A, B [auth D], C, D [auth B]	IPR006028	Gamma-aminobutyric acid A receptor/Glycine receptor alpha	Family
A, B [auth D], C, D [auth B]	IPR008127	Glycine receptor alpha	Family
A, B [auth D], C, D [auth B]	IPR006029	Neurotransmitter-gated ion-channel transmembrane domain	Domain
A, B [auth D], C, D [auth B]	IPR008128	Glycine receptor alpha1	Family
A, B [auth D], C, D [auth B]	IPR036734	Neurotransmitter-gated ion-channel ligand-binding domain superfamily	Homologous Superfamily
A, B [auth D], C, D [auth B]	IPR006201	Neurotransmitter-gated ion-channel	Family