9PHC | pdb_00009phc

In vitro reconstituted complex of purified S. pombe large ribosomal subunit and SNOR


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B0]Large ribosomal subunit protein eL42
B [auth B1]Large ribosomal subunit protein eL43A
C [auth B2]28S ribosomal RNA---
D [auth B3]5S ribosomal RNA---
E [auth B4]5.8S ribosomal RNA---
F [auth BN]Large ribosomal subunit protein uL2C
G [auth BO]Large ribosomal subunit protein uL3A
H [auth BP]Large ribosomal subunit protein uL4A
I [auth BQ]Large ribosomal subunit protein uL18B
J [auth BR]Large ribosomal subunit protein eL6
K [auth BS]Large ribosomal subunit protein uL30C
L [auth BT]Large ribosomal subunit protein eL8
M [auth BU]Large ribosomal subunit protein uL6B
N [auth BV]Large ribosomal subunit protein uL16A
O [auth BW]Large ribosomal subunit protein uL5A
Q [auth BY]Large ribosomal subunit protein eL14
S [auth Ba]Large ribosomal subunit protein uL13A
T [auth Bb]Large ribosomal subunit protein uL22A
U [auth Bc]Large ribosomal subunit protein eL18B
W [auth Be]Large ribosomal subunit protein eL20A
X [auth Bf]Large ribosomal subunit protein eL21B
Z [auth Bh]Large ribosomal subunit protein uL14B
AA [auth Bi]Large ribosomal subunit protein eL24B
BA [auth Bj]Large ribosomal subunit protein uL23A
CA [auth Bk]Large ribosomal subunit protein uL24
DA [auth Bl]Large ribosomal subunit protein eL27A
EA [auth Bm]Large ribosomal subunit protein uL15B
FA [auth Bn]Large ribosomal subunit protein eL29
GA [auth Bo]Large ribosomal subunit protein eL30A
HA [auth Bp]Large ribosomal subunit protein eL31
IA [auth Bq]Large ribosomal subunit protein eL32A
KA [auth Bs]Large ribosomal subunit protein eL34B
LA [auth Bt]Large ribosomal subunit protein uL29
MA [auth Bu]Large ribosomal subunit protein eL36B
OA [auth Bw]Large ribosomal subunit protein eL38A
PA [auth Bx]Large ribosomal subunit protein eL39
QA [auth By]Large ribosomal subunit protein eL28
RA [auth HS]SDO1-like protein C21C3.19-
NA [auth Bv]Large ribosomal subunit protein eL37B
JA [auth Br]Large ribosomal subunit protein eL33A
Y [auth Bg]Large ribosomal subunit protein eL22
V [auth Bd]Large ribosomal subunit protein eL19B
R [auth BZ]Large ribosomal subunit protein eL15B
P [auth BX]Large ribosomal subunit protein eL13

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B0]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
A [auth B0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
A [auth B0]IPR000552Large ribosomal subunit protein eL42Family
B [auth B1]IPR002674Large ribosomal subunit protein eL43Family
B [auth B1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
B [auth B1]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
B [auth B1]IPR050522Eukaryotic ribosomal protein eL43Family
F [auth BN]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
F [auth BN]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
F [auth BN]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
F [auth BN]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
F [auth BN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth BN]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
F [auth BN]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
F [auth BN]IPR002171Large ribosomal subunit protein uL2Family
G [auth BO]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
G [auth BO]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
G [auth BO]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
G [auth BO]IPR000597Large ribosomal subunit protein uL3Family
G [auth BO]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
H [auth BP]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
H [auth BP]IPR002136Large ribosomal subunit protein uL4Family
H [auth BP]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
H [auth BP]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
H [auth BP]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
I [auth BQ]IPR057268Large ribosomal subunit protein uL18Family
I [auth BQ]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
I [auth BQ]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
J [auth BR]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
J [auth BR]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
J [auth BR]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
J [auth BR]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
J [auth BR]IPR000915Large ribosomal subunit protein eL6Family
K [auth BS]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
K [auth BS]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
K [auth BS]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
K [auth BS]IPR039699Large ribosomal subunit protein uL30Family
K [auth BS]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
K [auth BS]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
K [auth BS]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
L [auth BT]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
L [auth BT]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
L [auth BT]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
L [auth BT]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
L [auth BT]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
L [auth BT]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
M [auth BU]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
M [auth BU]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
M [auth BU]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
M [auth BU]IPR000702Large ribosomal subunit protein uL6-likeFamily
N [auth BV]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
N [auth BV]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
N [auth BV]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
N [auth BV]IPR016180Large ribosomal subunit protein uL16 domainDomain
N [auth BV]IPR047873Large ribosomal subunit protein uL16Family
O [auth BW]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
O [auth BW]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
O [auth BW]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
O [auth BW]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
O [auth BW]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
O [auth BW]IPR002132Large ribosomal subunit protein uL5Family
Q [auth BY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Q [auth BY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth BY]IPR039660Large ribosomal subunit protein eL14Family
Q [auth BY]IPR002784Large ribosomal subunit protein eL14 domainDomain
Q [auth BY]IPR005824KOWDomain
S [auth Ba]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
S [auth Ba]IPR005822Large ribosomal subunit protein uL13Family
S [auth Ba]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
S [auth Ba]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
T [auth Bb]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
T [auth Bb]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
T [auth Bb]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
T [auth Bb]IPR001063Large ribosomal subunit protein uL22Family
U [auth Bc]IPR021131Large ribosomal subunit protein uL15/eL18Domain
U [auth Bc]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
U [auth Bc]IPR000039Large ribosomal subunit protein eL18Family
U [auth Bc]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
W [auth Be]IPR028877Large ribosomal subunit protein eL20Family
W [auth Be]IPR023573Large ribosomal subunit protein eL20 domainDomain
W [auth Be]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
X [auth Bf]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
X [auth Bf]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
X [auth Bf]IPR001147Large ribosomal subunit protein eL21Family
X [auth Bf]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Z [auth Bh]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
Z [auth Bh]IPR000218Large ribosomal subunit protein uL14Family
Z [auth Bh]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
AA [auth Bi]IPR056366Large ribosomal subunit protein eL24Family
AA [auth Bi]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
AA [auth Bi]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
AA [auth Bi]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
BA [auth Bj]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
BA [auth Bj]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
BA [auth Bj]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
BA [auth Bj]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
BA [auth Bj]IPR013025Large ribosomal subunit protein uL23-likeFamily
CA [auth Bk]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CA [auth Bk]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth Bk]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
CA [auth Bk]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
CA [auth Bk]IPR005824KOWDomain
CA [auth Bk]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
DA [auth Bl]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
DA [auth Bl]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
DA [auth Bl]IPR005824KOWDomain
DA [auth Bl]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DA [auth Bl]IPR001141Large ribosomal subunit protein eL27Family
DA [auth Bl]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
EA [auth Bm]IPR021131Large ribosomal subunit protein uL15/eL18Domain
EA [auth Bm]IPR030878Large ribosomal subunit protein uL15Family
EA [auth Bm]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
EA [auth Bm]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
FA [auth Bn]IPR002673Large ribosomal subunit protein eL29Family
GA [auth Bo]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
GA [auth Bo]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
GA [auth Bo]IPR039109Large ribosomal subunit protein eL30-likeFamily
GA [auth Bo]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
HA [auth Bp]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
HA [auth Bp]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
HA [auth Bp]IPR000054Large ribosomal subunit protein eL31Family
IA [auth Bq]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
IA [auth Bq]IPR001515Large ribosomal subunit protein eL32Family
IA [auth Bq]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
KA [auth Bs]IPR008195Large ribosomal subunit protein eL34Family
KA [auth Bs]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
KA [auth Bs]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
LA [auth Bt]IPR001854Large ribosomal subunit protein uL29Family
LA [auth Bt]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
LA [auth Bt]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
LA [auth Bt]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
MA [auth Bu]IPR000509Large ribosomal subunit protein eL36Family
MA [auth Bu]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
OA [auth Bw]IPR002675Large ribosomal subunit protein eL38Family
OA [auth Bw]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
PA [auth Bx]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
PA [auth Bx]IPR000077Large ribosomal subunit protein eL39Family
PA [auth Bx]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
QA [auth By]IPR029004Ribosomal eL28/Mak16Domain
QA [auth By]IPR002672Large ribosomal subunit protein eL28Family
RA [auth HS]IPR039100Ribosome maturation protein Sdo1/SBDS-likeFamily
RA [auth HS]IPR019783Ribosome maturation protein SDO1/SBDS, N-terminalDomain
RA [auth HS]IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilyHomologous Superfamily
NA [auth Bv]IPR001569Large ribosomal subunit protein eL37Family
NA [auth Bv]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
NA [auth Bv]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
NA [auth Bv]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
JA [auth Br]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
JA [auth Br]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
JA [auth Br]IPR001780Large ribosomal subunit protein eL33Family
JA [auth Br]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
Y [auth Bg]IPR002671Large ribosomal subunit protein eL22Family
Y [auth Bg]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
V [auth Bd]IPR039547Large ribosomal subunit protein eL19Family
V [auth Bd]IPR057260Ribosomal protein L19e, C-terminal domainDomain
V [auth Bd]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
V [auth Bd]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
V [auth Bd]IPR057259Ribosomal protein L19e, N-terminal domainDomain
V [auth Bd]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
V [auth Bd]IPR000196Large ribosomal subunit protein eL19 domainDomain
R [auth BZ]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
R [auth BZ]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
R [auth BZ]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
R [auth BZ]IPR000439Large ribosomal subunit protein eL15Family
P [auth BX]IPR001380Large ribosomal subunit protein eL13Family
P [auth BX]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site