9P1U | pdb_00009p1u

beta-barrel assembly machine from Escherichia coli in an late state of LptD assembly

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth D]	Outer membrane protein assembly factor BamD	-	membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization establishment of protein localization cellular localization establishment of protein localization to membrane membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization establishment of protein localization cellular localization establishment of protein localization to membrane localization within membrane establishment of localization localization macromolecule localization intracellular protein localization protein insertion into membrane	cellular anatomical structure membrane cell periphery cell outer membrane external encapsulating structure cell envelope outer membrane protein-containing complex periplasmic side of cell outer membrane membrane protein complex side of membrane Bam protein complex
C [auth E]	Outer membrane protein assembly factor BamE	protein-macromolecule adaptor activity molecular adaptor activity identical protein binding protein binding binding	membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization establishment of protein localization cellular localization establishment of protein localization to membrane membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization establishment of protein localization cellular localization establishment of protein localization to membrane localization within membrane establishment of localization localization macromolecule localization intracellular protein localization protein insertion into membrane response to stimulus response to chemical response to antibiotic	cellular anatomical structure membrane protein-containing complex periplasmic side of cell outer membrane membrane protein complex side of membrane Bam protein complex cell periphery cell outer membrane external encapsulating structure cell envelope outer membrane
G [auth A]	Outer membrane protein assembly factor BamA	protein binding binding protein-folding chaperone binding	membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization establishment of protein localization cellular localization establishment of protein localization to membrane membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization establishment of protein localization cellular localization establishment of protein localization to membrane localization within membrane establishment of localization localization macromolecule localization intracellular protein localization protein insertion into membrane cell adhesion	cellular anatomical structure membrane cell periphery cell outer membrane external encapsulating structure cell envelope outer membrane protein-containing complex periplasmic side of cell outer membrane membrane protein complex side of membrane Bam protein complex
F [auth B]	Outer membrane protein assembly factor BamB	identical protein binding protein binding binding	membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization establishment of protein localization cellular localization establishment of protein localization to membrane membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization establishment of protein localization cellular localization establishment of protein localization to membrane localization within membrane establishment of localization localization macromolecule localization intracellular protein localization protein insertion into membrane	cellular anatomical structure membrane cell periphery cell outer membrane external encapsulating structure cell envelope outer membrane protein-containing complex periplasmic side of cell outer membrane membrane protein complex side of membrane Bam protein complex
E [auth F]	LPS-assembly protein LptD	-	membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization localization transport lipopolysaccharide transport membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization localization transport lipopolysaccharide transport macromolecule localization lipid localization lipid transport carbohydrate derivative transport establishment of localization	protein-containing complex transporter complex cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane
D [auth G]	LPS-assembly lipoprotein LptE	binding lipid binding lipopolysaccharide binding carbohydrate derivative binding	membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization localization transport lipopolysaccharide transport membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization localization transport lipopolysaccharide transport macromolecule localization lipid localization lipid transport carbohydrate derivative transport establishment of localization	protein-containing complex transporter complex cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane
A [auth C]	Outer membrane protein assembly factor BamC	identical protein binding protein binding binding	membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization establishment of protein localization cellular localization establishment of protein localization to membrane membrane organization membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly cellular process cellular component organization or biogenesis cell envelope organization Gram-negative-bacterium-type cell outer membrane assembly external encapsulating structure organization establishment of protein localization cellular localization establishment of protein localization to membrane localization within membrane establishment of localization localization macromolecule localization intracellular protein localization protein insertion into membrane	cell surface cellular anatomical structure membrane protein-containing complex periplasmic side of cell outer membrane membrane protein complex side of membrane Bam protein complex cell periphery cell outer membrane external encapsulating structure cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth D]	IPR039565	Outer membrane lipoprotein BamD-like	Domain
B [auth D]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
B [auth D]	IPR017689	Outer membrane protein assembly factor BamD	Family
C [auth E]	IPR037873	BamE-like	Homologous Superfamily
C [auth E]	IPR007450	Outer membrane protein assembly factor BamE domain	Domain
C [auth E]	IPR026592	Outer membrane protein assembly factor BamE	Family
G [auth A]	IPR039910	Surface antigen D15-like	Family
G [auth A]	IPR034746	POTRA domain	Domain
G [auth A]	IPR000184	Bacterial surface antigen (D15)	Domain
G [auth A]	IPR010827	POTRA domain, BamA/TamA-like	Domain
G [auth A]	IPR023707	Outer membrane protein assembly factor BamA	Family
F [auth B]	IPR018391	Pyrrolo-quinoline quinone beta-propeller repeat	Repeat
F [auth B]	IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	Homologous Superfamily
F [auth B]	IPR017687	Outer membrane protein assembly factor BamB	Family
F [auth B]	IPR002372	Pyrrolo-quinoline quinone repeat domain	Domain
F [auth B]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
E [auth F]	IPR007543	LptD, C-terminal	Domain
E [auth F]	IPR020889	LPS-assembly protein LptD	Family
E [auth F]	IPR050218	Lipopolysaccharide Assembly Protein LptD	Family
E [auth F]	IPR005653	Organic solvent tolerance-like, N-terminal	Domain
D [auth G]	IPR007485	LPS-assembly lipoprotein LptE	Family
A [auth C]	IPR010653	Outer membrane protein assembly factor BamC-like	Family
A [auth C]	IPR042268	Outer membrane protein assembly factor BamC, C-terminal	Homologous Superfamily
A [auth C]	IPR014524	Outer membrane protein assembly factor BamC	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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beta-barrel assembly machine from Escherichia coli in an late state of LptD assembly

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

9P1U | pdb_00009p1u