9OWI | pdb_00009owi

Structure of the A. thaliana TBP bound to TBP-AG nicked DNA site

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth D], F [auth H]	DNA (5'-D(TPTPTPTPAPTPAPG)-3')	-	-	-
B [auth C], E [auth F]	DNA (5'-D(CPTPAPTPAPAPAPAPGPCPGPC)-3')	-	-	-
A [auth B], D [auth E], G [auth I], H [auth J], I [auth K], A [auth B], D [auth E], G [auth I], H [auth J], I [auth K], J [auth L]	TATA-box-binding protein 1	DNA binding binding nucleic acid binding general transcription initiation factor activity RNA polymerase II general transcription initiation factor activity	RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process DNA-templated transcription initiation nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process DNA-templated transcription initiation nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], D [auth E], G [auth I], H [auth J], I [auth K], A [auth B], D [auth E], G [auth I], H [auth J], I [auth K], J [auth L]	IPR030491	TATA-box binding protein, conserved site	Conserved Site
A [auth B], D [auth E], G [auth I], H [auth J], I [auth K], A [auth B], D [auth E], G [auth I], H [auth J], I [auth K], J [auth L]	IPR000814	TATA-box binding protein	Family
A [auth B], D [auth E], G [auth I], H [auth J], I [auth K], A [auth B], D [auth E], G [auth I], H [auth J], I [auth K], J [auth L]	IPR012295	TBP domain superfamily	Homologous Superfamily
A [auth B], D [auth E], G [auth I], H [auth J], I [auth K], A [auth B], D [auth E], G [auth I], H [auth J], I [auth K], J [auth L]	IPR033710	TATA-box binding protein, eukaryotic	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.