Annotations: 9OW4

Hedgehog coronavirus ErinCoV-12-19 spike receptor binding domain in complex with hedgehog APN

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, D	PF11838	ERAP1-like C-terminal domain (ERAP1_C)	ERAP1-like C-terminal domain	This large domain is composed of 16 alpha helices organized as 8 HEAT-like repeats. This domain forms a concave face that faces towards the active site of the peptidase.	Domain
A, D	PF01433	Peptidase family M1 domain (Peptidase_M1)	Peptidase family M1 domain	Members of this family are aminopeptidases. The members differ widely in specificity, hydrolysing acidic, basic or neutral N-terminal residues. This family includes leukotriene-A4 hydrolase Swiss:P09960, this enzyme also has an aminopeptidase activ ...	Members of this family are aminopeptidases. The members differ widely in specificity, hydrolysing acidic, basic or neutral N-terminal residues. This family includes leukotriene-A4 hydrolase Swiss:P09960, this enzyme also has an aminopeptidase activity [1].	Domain
A, D	PF17900	Peptidase M1 N-terminal domain (Peptidase_M1_N)	Peptidase M1 N-terminal domain	This domain is found at the N-terminus of aminopeptidases from the M1 family.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, F	Spike glycoprotein	-	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms receptor-mediated virion attachment to host cell adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction membrane organization cellular component organization membrane fusion viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms receptor-mediated virion attachment to host cell adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction membrane organization cellular component organization membrane fusion fusion of virus membrane with host plasma membrane cellular process cellular component organization or biogenesis symbiont entry into host cell symbiont entry into host endocytosis involved in viral entry into host cell	cellular anatomical structure membrane virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane other organism part host cell cytoplasm part host intracellular organelle host cell endoplasmic reticulum-Golgi intermediate compartment membrane host cell endoplasmic reticulum-Golgi intermediate compartment host cell cytoplasm cellular anatomical structure membrane virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane other organism part host cell cytoplasm part host intracellular organelle host cell endoplasmic reticulum-Golgi intermediate compartment membrane host cell endoplasmic reticulum-Golgi intermediate compartment host cell cytoplasm host cell part host intracellular region viral membrane viral envelope host cell plasma membrane
B, E	Amastatin	-	-	-
A, D	Aminopeptidase	binding peptide binding peptidase activity alanyl aminopeptidase activity catalytic activity, acting on a protein aminopeptidase activity hydrolase activity exopeptidase activity catalytic activity cation binding transition metal ion binding zinc ion binding ion binding metal ion binding binding peptide binding peptidase activity alanyl aminopeptidase activity catalytic activity, acting on a protein aminopeptidase activity hydrolase activity exopeptidase activity catalytic activity cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding metallopeptidase activity metalloaminopeptidase activity metalloexopeptidase activity	catabolic process metabolic process cellular process peptide metabolic process peptide catabolic process proteolysis primary metabolic process protein metabolic process macromolecule metabolic process	cell periphery cellular anatomical structure plasma membrane membrane intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, F	IPR018548	Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirus	Domain
C, F	IPR032500	Spike glycoprotein S1, N-terminal domain, betacoronavirus-like	Domain
C, F	IPR042578	Spike glycoprotein, betacoronavirus	Family
C, F	IPR036326	Spike S1 subunit, receptor binding domain superfamily, betacoronavirus	Homologous Superfamily
C, F	IPR043002	Spike glycoprotein, N-terminal domain superfamily	Homologous Superfamily
C, F	IPR044874	Spike glycoprotein S2, coronavirus, heptad repeat 2	Domain
C, F	IPR044364	Spike (S) protein S1 subunit, receptor-binding domain, HKU5-like	Domain
C, F	IPR044337	Spike (S) protein S1 subunit, N-terminal domain, MERS-CoV-like	Domain
C, F	IPR043614	Spike glycoprotein S2, coronavirus, C-terminal	Domain
C, F	IPR044873	Spike glycoprotein S2, coronavirus, heptad repeat 1	Domain
C, F	IPR043473	Spike glycoprotein S2 superfamily, coronavirus	Homologous Superfamily
C, F	IPR043607	Coronavirus spike glycoprotein S1, C-terminal	Domain
C, F	IPR002552	Spike glycoprotein S2, coronavirus	Domain
A, D	IPR001930	Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase	Family
A, D	IPR027268	Peptidase M4/M1, CTD superfamily	Homologous Superfamily
A, D	IPR034016	Aminopeptidase N-type	Family
A, D	IPR014782	Peptidase M1, membrane alanine aminopeptidase	Domain
A, D	IPR045357	Aminopeptidase N-like , N-terminal domain	Domain
A, D	IPR042097	Aminopeptidase N-like , N-terminal domain superfamliy	Homologous Superfamily
A, D	IPR024571	ERAP1-like C-terminal domain	Domain
A, D	IPR050344	Peptidase M1 family aminopeptidases	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9OW4 | pdb_00009ow4

Hedgehog coronavirus ErinCoV-12-19 spike receptor binding domain in complex with hedgehog APN

External Resource: Annotation

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage