9NW3 | pdb_00009nw3

Ciliary tip central pair


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05186Dpy-30 motif (Dpy-30)Dpy-30 motif- Motif
QC [auth 6A],
RC [auth 6B],
SC [auth 6C]
PF18171SLOG in TRPM, prokaryote (LSDAT_prok)SLOG in TRPM, prokaryote- Family
GC [auth 3A],
HC [auth 3B],
IC [auth 3C]
PF00168C2 domain (C2)C2 domainDomain
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
PF06294CH-like domain in sperm protein (CH_2)CH-like domain in sperm proteinSpef is a region of sperm flagellar proteins. It probably exerts a role in spermatogenesis in that the protein is expressed predominantly in adult tissue. It is present in the tails of developing and epididymal sperm internal to the fibrous sheath an ...Spef is a region of sperm flagellar proteins. It probably exerts a role in spermatogenesis in that the protein is expressed predominantly in adult tissue. It is present in the tails of developing and epididymal sperm internal to the fibrous sheath and around the dense outer fibres of the sperm flagellum [1]. The amino-terminal domain (residues 1-110) shows a possible calponin homology (CH) domain; however Spef does not bind actin directly under in vitro conditions, so the function of the amino-terminal calponin-like domain is unclear [1]. Transcription aberrations leading to a truncated protein result in immotile sperm [2].
Domain
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Dpy-30 motif protein- -
QC [auth 6A],
RC [auth 6B],
SC [auth 6C]
Cation channel family protein- - -
NC [auth 5A],
OC [auth 5B],
PC [auth 5C]
TLP2-
JC [auth 4A],
KC [auth 4B],
LC [auth 4C],
MC [auth 4D]
CFAP213- - -
GC [auth 3A],
HC [auth 3B],
IC [auth 3C]
C2 domain protein- - -
DC [auth 2A],
EC [auth 2B],
FC [auth 2C]
TLP1- - -
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
Sperm flagellar protein
Tubulin beta chain
Unknown---
Tubulin alpha chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR007858Dpy-30 motifConserved Site
IPR049629DPY30/SDC1, dimerization/docking domainDomain
QC [auth 6A],
RC [auth 6B],
SC [auth 6C]
IPR041482LSDAT, prokaryoteDomain
NC [auth 5A],
OC [auth 5B],
PC [auth 5C]
IPR016024Armadillo-type foldHomologous Superfamily
GC [auth 3A],
HC [auth 3B],
IC [auth 3C]
IPR000008C2 domainDomain
GC [auth 3A],
HC [auth 3B],
IC [auth 3C]
IPR035892C2 domain superfamilyHomologous Superfamily
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
IPR036872CH domain superfamilyHomologous Superfamily
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
IPR001715Calponin homology domainDomain
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
IPR010441CH-like domain in sperm proteinDomain
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
IPR052111Spermatogenesis and Ciliary Microtubule-associated ProteinFamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR002453Beta tubulinFamily
IPR013838Beta tubulin, autoregulation binding siteBinding Site
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR002452Alpha tubulinFamily
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily