9NW3 | pdb_00009nw3

Ciliary tip central pair


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DA [auth EF]Cofilin_ADFe9nw3EF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
DB [auth JB]Cofilin_ADFe9nw3JB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
HA [auth FD]Cofilin_ADFe9nw3FD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
JA [auth FF]Cofilin_ADFe9nw3FF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
ZB [auth MF]Cofilin_ADFe9nw3MF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
ZA [auth ID]Cofilin_ADFe9nw3ID1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
Z [auth EB]Cofilin_ADFe9nw3EB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
XB [auth MD]Cofilin_ADFe9nw3MD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
XA [auth IB]Cofilin_ADFe9nw3IB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
X [auth DF]Cofilin_ADFe9nw3DF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
VB [auth MB]Cofilin_ADFe9nw3MB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
VA [auth HF]Cofilin_ADFe9nw3HF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
V [auth DD]Cofilin_ADFe9nw3DD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
TB [auth LF]Cofilin_ADFe9nw3LF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
TA [auth HD]Cofilin_ADFe9nw3HD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
T [auth DB]Cofilin_ADFe9nw3DB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
RB [auth LD]Cofilin_ADFe9nw3LD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
RA [auth HB]Cofilin_ADFe9nw3HB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
R [auth CF]Cofilin_ADFe9nw3CF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
PB [auth LB]Cofilin_ADFe9nw3LB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
PA [auth GF]Cofilin_ADFe9nw3GF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
P [auth CD]Cofilin_ADFe9nw3CD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
NB [auth KF]Cofilin_ADFe9nw3KF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
NA [auth GD]Cofilin_ADFe9nw3GD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
N [auth CB]Cofilin_ADFe9nw3CB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
LB [auth KD]Cofilin_ADFe9nw3KD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
LA [auth GB]Cofilin_ADFe9nw3GB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
L [auth BF]Cofilin_ADFe9nw3BF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
JB [auth KB]Cofilin_ADFe9nw3KB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
J [auth BD]Cofilin_ADFe9nw3BD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
HB [auth JF]Cofilin_ADFe9nw3JF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
H [auth BB]Cofilin_ADFe9nw3BB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
FB [auth JD]Cofilin_ADFe9nw3JD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
FA [auth FB]Cofilin_ADFe9nw3FB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
F [auth AF]Cofilin_ADFe9nw3AF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
D [auth AD]Cofilin_ADFe9nw3AD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
BB [auth IF]Cofilin_ADFe9nw3IF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
BA [auth ED]Cofilin_ADFe9nw3ED1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
B [auth AB]Cofilin_ADFe9nw3AB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
AB [auth IE]Cofilin_ADFe9nw3IE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
IA [auth FE]Cofilin_ADFe9nw3FE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
W [auth DE]Cofilin_ADFe9nw3DE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
YB [auth ME]Cofilin_ADFe9nw3ME1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
YA [auth IC]Cofilin_ADFe9nw3IC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
Y [auth EA]Cofilin_ADFe9nw3EA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
WB [auth MC]Cofilin_ADFe9nw3MC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
WA [auth IA]Cofilin_ADFe9nw3IA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
UB [auth MA]Cofilin_ADFe9nw3MA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
UA [auth HE]Cofilin_ADFe9nw3HE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
U [auth DC]Cofilin_ADFe9nw3DC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
SB [auth LE]Cofilin_ADFe9nw3LE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
SA [auth HC]Cofilin_ADFe9nw3HC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
S [auth DA]Cofilin_ADFe9nw3DA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
QB [auth LC]Cofilin_ADFe9nw3LC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
QA [auth HA]Cofilin_ADFe9nw3HA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
Q [auth CE]Cofilin_ADFe9nw3CE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
OB [auth LA]Cofilin_ADFe9nw3LA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
OA [auth GE]Cofilin_ADFe9nw3GE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
O [auth CC]Cofilin_ADFe9nw3CC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
MB [auth KE]Cofilin_ADFe9nw3KE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
MA [auth GC]Cofilin_ADFe9nw3GC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
M [auth CA]Cofilin_ADFe9nw3CA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
KB [auth KC]Cofilin_ADFe9nw3KC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
KA [auth GA]Cofilin_ADFe9nw3GA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
K [auth BE]Cofilin_ADFe9nw3BE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
IB [auth KA]Cofilin_ADFe9nw3KA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
I [auth BC]Cofilin_ADFe9nw3BC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
GB [auth JE]Cofilin_ADFe9nw3JE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
GA [auth FC]Cofilin_ADFe9nw3FC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
G [auth BA]Cofilin_ADFe9nw3BA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
EB [auth JC]Cofilin_ADFe9nw3JC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
EA [auth FA]Cofilin_ADFe9nw3FA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
E [auth AE]Cofilin_ADFe9nw3AE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
CB [auth JA]Cofilin_ADFe9nw3JA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
CA [auth EE]Cofilin_ADFe9nw3EE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
C [auth AC]Cofilin_ADFe9nw3AC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
AA [auth EC]Cofilin_ADFe9nw3EC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)
A [auth AA]Cofilin_ADFe9nw3AA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Cofilin_ADFECOD (v295)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05186Dpy-30 motif (Dpy-30)Dpy-30 motif- Motif
QC [auth 6A],
RC [auth 6B],
SC [auth 6C]
PF18171SLOG in TRPM, prokaryote (LSDAT_prok)SLOG in TRPM, prokaryote- Family
GC [auth 3A],
HC [auth 3B],
IC [auth 3C]
PF00168C2 domain (C2)C2 domainDomain
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
PF06294CH-like domain in sperm protein (CH_2)CH-like domain in sperm proteinSpef is a region of sperm flagellar proteins. It probably exerts a role in spermatogenesis in that the protein is expressed predominantly in adult tissue. It is present in the tails of developing and epididymal sperm internal to the fibrous sheath an ...Spef is a region of sperm flagellar proteins. It probably exerts a role in spermatogenesis in that the protein is expressed predominantly in adult tissue. It is present in the tails of developing and epididymal sperm internal to the fibrous sheath and around the dense outer fibres of the sperm flagellum [1]. The amino-terminal domain (residues 1-110) shows a possible calponin homology (CH) domain; however Spef does not bind actin directly under in vitro conditions, so the function of the amino-terminal calponin-like domain is unclear [1]. Transcription aberrations leading to a truncated protein result in immotile sperm [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Dpy-30 motif protein- -
QC [auth 6A],
RC [auth 6B],
SC [auth 6C]
Cation channel family protein- - -
NC [auth 5A],
OC [auth 5B],
PC [auth 5C]
TLP2-
JC [auth 4A],
KC [auth 4B],
LC [auth 4C],
MC [auth 4D]
CFAP213- - -
GC [auth 3A],
HC [auth 3B],
IC [auth 3C]
C2 domain protein- - -
DC [auth 2A],
EC [auth 2B],
FC [auth 2C]
TLP1- - -
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
Sperm flagellar protein
Tubulin beta chain
Unknown---
Tubulin alpha chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR007858Dpy-30 motifConserved Site
IPR049629DPY30/SDC1, dimerization/docking domainDomain
QC [auth 6A],
RC [auth 6B],
SC [auth 6C]
IPR041482LSDAT, prokaryoteDomain
NC [auth 5A],
OC [auth 5B],
PC [auth 5C]
IPR016024Armadillo-type foldHomologous Superfamily
GC [auth 3A],
HC [auth 3B],
IC [auth 3C]
IPR000008C2 domainDomain
GC [auth 3A],
HC [auth 3B],
IC [auth 3C]
IPR035892C2 domain superfamilyHomologous Superfamily
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
IPR036872CH domain superfamilyHomologous Superfamily
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
IPR001715Calponin homology domainDomain
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
IPR010441CH-like domain in sperm proteinDomain
AC [auth 1A],
BC [auth 1B],
CC [auth 1C]
IPR052111Spermatogenesis and Ciliary Microtubule-associated ProteinFamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR002453Beta tubulinFamily
IPR013838Beta tubulin, autoregulation binding siteBinding Site
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR002452Alpha tubulinFamily
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily