9NTA | pdb_00009nta

Methanosarcina acetivorans 50S subunit obtained from methanol-grown cells

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
I [auth BI]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e		Domain
H [auth BH]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
G [auth BG]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain
F [auth BF]	PF00935	Ribosomal protein L44 (Ribosomal_L44)	Ribosomal protein L44	-	Family
F [auth BF]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5		Domain
F [auth BF]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
E [auth BE]	PF01020	Ribosomal L40e family (Ribosomal_L40e)	Ribosomal L40e family	Bovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2].	Domain
E [auth BE]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
D [auth BD]	PF00832	Ribosomal L39 protein (Ribosomal_L39)	Ribosomal L39 protein	-	Family
D [auth BD]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
C [auth BC]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
C [auth BC]	PF00181	Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)	Ribosomal Proteins L2, RNA binding N-terminal domain		Domain
C [auth BC]	PF01907	Ribosomal protein L37e (Ribosomal_L37e)	Ribosomal protein L37e	-	Family
Z [auth BZ]	PF01198	Ribosomal protein L31e (Ribosomal_L31e)	Ribosomal protein L31e	-	Family
X [auth BX]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
W [auth BW]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
V [auth BV]	PF01246	Ribosomal protein L24e (Ribosomal_L24e)	Ribosomal protein L24e		Domain
U [auth BU]	PF16906	Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)	Ribosomal proteins L26 eukaryotic, L24P archaeal	-	Family
U [auth BU]	PF00467	KOW motif (KOW)	KOW motif	-	Family
T [auth BT]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
B [auth BB]	PF01780	Ribosomal L37ae protein family (Ribosomal_L37ae)	Ribosomal L37ae protein family	-	Family
S [auth BS]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
P [auth BP]	PF01280	Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)	Ribosomal protein L19e, N-terminal domain	This domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology.	Domain
O [auth BO]	PF17135	Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)	Ribosomal protein 60S L18 and 50S L18e	-	Family
N [auth BN]	PF17144	Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)	Ribosomal large subunit proteins 60S L5, and 50S L18	-	Family
M [auth BM]	PF00827	Ribosomal L15 (Ribosomal_L15e)	Ribosomal L15	-	Family
L [auth BL]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins.	Domain
K [auth BK]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain
A [auth BA]	PF01655	Ribosomal protein L32 (Ribosomal_L32e)	Ribosomal protein L32	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth BI]	Large ribosomal subunit protein uL16	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
H [auth BH]	Large ribosomal subunit protein eL8	RNA binding binding rRNA binding nucleic acid binding tRNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity, acting on a tRNA hydrolase activity nuclease activity hydrolase activity, acting on ester bonds RNA binding binding rRNA binding nucleic acid binding tRNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity, acting on a tRNA hydrolase activity nuclease activity hydrolase activity, acting on ester bonds RNA endonuclease activity ribonuclease P activity catalytic activity structural molecule activity structural constituent of ribosome	RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process tRNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process tRNA processing RNA 5'-end processing metabolic process RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process tRNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process tRNA processing RNA 5'-end processing metabolic process cellular process macromolecule metabolic process RNA processing tRNA 5'-leader removal tRNA 5'-end processing cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular component organization or biogenesis protein metabolic process translation protein biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
G [auth BG]	Large ribosomal subunit protein uL6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
F [auth BF]	Large ribosomal subunit protein uL5	RNA binding binding nucleic acid binding tRNA binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
E [auth BE]	Large ribosomal subunit protein uL4	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
D [auth BD]	Large ribosomal subunit protein uL3	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
FA [auth Bf]	Large ribosomal subunit protein eL42	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
EA [auth Be]	Large ribosomal subunit protein eL40	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
DA [auth Bd]	Large ribosomal subunit protein eL39	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
C [auth BC]	Large ribosomal subunit protein uL2	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
CA [auth Bc]	Large ribosomal subunit protein eL37	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
BA [auth Bb]	Large ribosomal subunit protein eL43	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
AA [auth Ba]	Large ribosomal subunit protein eL32	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Z [auth BZ]	Large ribosomal subunit protein eL31	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Y [auth BY]	Large ribosomal subunit protein eL30	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
X [auth BX]	Large ribosomal subunit protein uL30	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process ribosomal large subunit biogenesis macromolecule biosynthetic process nucleic acid metabolic process maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) biosynthetic process cellular process metabolic process macromolecule metabolic process maturation of LSU-rRNA protein metabolic process translation protein biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
W [auth BW]	Large ribosomal subunit protein uL29	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
V [auth BV]	Large ribosomal subunit protein eL24	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
U [auth BU]	Large ribosomal subunit protein uL24	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular component organization or biogenesis ribosomal large subunit biogenesis	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
T [auth BT]	Large ribosomal subunit protein uL23	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
B [auth BB]	5S rRNA	-	-	-
S [auth BS]	Large ribosomal subunit protein uL22	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
R [auth BR]	Large ribosomal subunit protein eL21	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Q [auth BQ]	Large ribosomal subunit protein eL20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
P [auth BP]	Large ribosomal subunit protein eL19	RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
O [auth BO]	Large ribosomal subunit protein eL18	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
N [auth BN]	Large ribosomal subunit protein uL18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
M [auth BM]	Large ribosomal subunit protein eL15	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
L [auth BL]	Large ribosomal subunit protein uL15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
K [auth BK]	Large ribosomal subunit protein uL14	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
J [auth BJ]	Large ribosomal subunit protein uL13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
A [auth BA]	23S rRNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I [auth BI]	IPR001197	Large ribosomal subunit protein uL16, eukaryota/archaea	Family
I [auth BI]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
I [auth BI]	IPR018255	Large ribosomal subunit protein uL16, conserved site, eukaryota/archaea	Conserved Site
I [auth BI]	IPR022981	Large ribosomal subunit protein uL16, archaea	Family
I [auth BI]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
I [auth BI]	IPR047873	Large ribosomal subunit protein uL16	Family
H [auth BH]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
H [auth BH]	IPR022481	Large ribosomal subunit protein eL8, archaea	Family
H [auth BH]	IPR004037	Large ribosomal subunit protein eL8-like, conserved site	Conserved Site
H [auth BH]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
H [auth BH]	IPR018492	Ribosomal protein eL8/Nhp2 family	Family
G [auth BG]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
G [auth BG]	IPR019907	Large ribosomal subunit protein uL6, archaea	Family
G [auth BG]	IPR002359	Large ribosomal subunit protein uL6, conserved site-2	Conserved Site
G [auth BG]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
G [auth BG]	IPR000702	Large ribosomal subunit protein uL6-like	Family
F [auth BF]	IPR020929	Large ribosomal subunit protein uL5, conserved site	Conserved Site
F [auth BF]	IPR022804	Large ribosomal subunit protein uL5, archaea	Family
F [auth BF]	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
F [auth BF]	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
F [auth BF]	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
F [auth BF]	IPR002132	Large ribosomal subunit protein uL5	Family
E [auth BE]	IPR019970	Large ribosomal subunit protein uL4, archaea	Family
E [auth BE]	IPR002136	Large ribosomal subunit protein uL4	Family
E [auth BE]	IPR013000	Large ribosomal subunit protein uL4, eukaryota/archaea, conserved site	Conserved Site
E [auth BE]	IPR045240	Large ribosomal subunit protein uL4, eukaryota/archaea	Family
E [auth BE]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
D [auth BD]	IPR019928	Large ribosomal subunit protein uL3, archaea	Family
D [auth BD]	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
D [auth BD]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
D [auth BD]	IPR044892	Ribosomal protein L3, domain 3, archaeal-type superfamily	Homologous Superfamily
D [auth BD]	IPR000597	Large ribosomal subunit protein uL3	Family
D [auth BD]	IPR045077	Large ribosomal subunit protein uL3, archaea/eukaryota	Family
FA [auth Bf]	IPR053708	Eukaryotic Ribosomal Large Subunit eL42	Homologous Superfamily
FA [auth Bf]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
FA [auth Bf]	IPR000552	Large ribosomal subunit protein eL42	Family
EA [auth Be]	IPR023657	Large ribosomal subunit protein eL40, archaea	Family
EA [auth Be]	IPR001975	Large ribosomal subunit protein eL40 domain	Domain
EA [auth Be]	IPR038587	Large ribosomal subunit protein eL40 superfamily	Homologous Superfamily
EA [auth Be]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
DA [auth Bd]	IPR023626	Large ribosomal subunit protein eL39 domain superfamily	Homologous Superfamily
DA [auth Bd]	IPR000077	Large ribosomal subunit protein eL39	Family
DA [auth Bd]	IPR020083	Large ribosomal subunit protein eL39, conserved site	Conserved Site
C [auth BC]	IPR023672	Large ribosomal subunit protein uL2, archaea/eukaryota	Family
C [auth BC]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
C [auth BC]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
C [auth BC]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
C [auth BC]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
C [auth BC]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
C [auth BC]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
C [auth BC]	IPR002171	Large ribosomal subunit protein uL2	Family
CA [auth Bc]	IPR001569	Large ribosomal subunit protein eL37	Family
CA [auth Bc]	IPR018267	Large ribosomal subunit protein eL37, conserved site	Conserved Site
CA [auth Bc]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
CA [auth Bc]	IPR011331	Large ribosomal subunit protein eL37/eL43	Homologous Superfamily
BA [auth Bb]	IPR002674	Large ribosomal subunit protein eL43	Family
BA [auth Bb]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
BA [auth Bb]	IPR011331	Large ribosomal subunit protein eL37/eL43	Homologous Superfamily
BA [auth Bb]	IPR050522	Eukaryotic ribosomal protein eL43	Family
AA [auth Ba]	IPR036351	Large ribosomal subunit protein eL32 superfamily	Homologous Superfamily
AA [auth Ba]	IPR023654	Large ribosomal subunit protein eL32, archaea	Family
AA [auth Ba]	IPR001515	Large ribosomal subunit protein eL32	Family
AA [auth Ba]	IPR018263	Large ribosomal subunit protein eL32, conserved site	Conserved Site
Z [auth BZ]	IPR020052	Large ribosomal subunit protein eL31, conserved site	Conserved Site
Z [auth BZ]	IPR023621	Large ribosomal subunit protein eL31 domain superfamily	Homologous Superfamily
Z [auth BZ]	IPR000054	Large ribosomal subunit protein eL31	Family
Y [auth BY]	IPR022991	Large ribosomal subunit protein eL30, conserved site	Conserved Site
Y [auth BY]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
Y [auth BY]	IPR000231	Large ribosomal subunit protein eL30	Family
Y [auth BY]	IPR039109	Large ribosomal subunit protein eL30-like	Family
Y [auth BY]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
X [auth BX]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
X [auth BX]	IPR039699	Large ribosomal subunit protein uL30	Family
X [auth BX]	IPR035808	Large ribosomal subunit protein uL30, eukaryota/archaea	Domain
X [auth BX]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
X [auth BX]	IPR018038	Large ribosomal subunit protein uL30, conserved site	Conserved Site
X [auth BX]	IPR005997	Large ribosomal subunit protein uL30, archaea	Family
W [auth BW]	IPR001854	Large ribosomal subunit protein uL29	Family
W [auth BW]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
W [auth BW]	IPR018254	Large ribosomal subunit protein uL29, conserved site	Conserved Site
V [auth BV]	IPR011017	TRASH domain	Domain
V [auth BV]	IPR000988	Large ribosomal subunit protein eL24-related, N-terminal	Domain
V [auth BV]	IPR055345	Large ribosomal subunit protein eL24-like, archaea	Family
V [auth BV]	IPR023442	Large ribosomal subunit protein eL24, conserved site	Conserved Site
V [auth BV]	IPR038630	Ribosomal protein L24e/L24 superfamily	Homologous Superfamily
U [auth BU]	IPR005756	Large ribosomal subunit protein uL24, eukaryota_archaea	Family
U [auth BU]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
U [auth BU]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
U [auth BU]	IPR005824	KOW	Domain
U [auth BU]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
U [auth BU]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
T [auth BT]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
T [auth BT]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
T [auth BT]	IPR019985	Large ribosomal subunit protein uL23	Family
T [auth BT]	IPR013025	Large ribosomal subunit protein uL23-like	Family
S [auth BS]	IPR005721	Large ribosomal subunit protein uL22, eukaryota/archaea	Family
S [auth BS]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
S [auth BS]	IPR001063	Large ribosomal subunit protein uL22	Family
R [auth BR]	IPR018259	Large ribosomal subunit protein eL21, conserved site	Conserved Site
R [auth BR]	IPR036948	Large ribosomal subunit protein eL21 superfamily	Homologous Superfamily
R [auth BR]	IPR022856	Large ribosomal subunit protein eL21, archaea	Family
R [auth BR]	IPR001147	Large ribosomal subunit protein eL21	Family
R [auth BR]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
Q [auth BQ]	IPR028877	Large ribosomal subunit protein eL20	Family
Q [auth BQ]	IPR023573	Large ribosomal subunit protein eL20 domain	Domain
P [auth BP]	IPR015974	Large ribosomal subunit protein eL19, domain 3	Homologous Superfamily
P [auth BP]	IPR039547	Large ribosomal subunit protein eL19	Family
P [auth BP]	IPR057260	Ribosomal protein L19e, C-terminal domain	Domain
P [auth BP]	IPR033936	Large ribosomal subunit protein eL19, archaea	Domain
P [auth BP]	IPR015973	Large ribosomal subunit protein eL19, domain 2	Homologous Superfamily
P [auth BP]	IPR015972	Large ribosomal subunit protein eL19, domain 1	Homologous Superfamily
P [auth BP]	IPR057259	Ribosomal protein L19e, N-terminal domain	Domain
P [auth BP]	IPR035970	Large ribosomal subunit protein eL19 superfamily	Homologous Superfamily
P [auth BP]	IPR000196	Large ribosomal subunit protein eL19 domain	Domain
O [auth BO]	IPR022947	Large ribosomal subunit protein eL18, archaea	Family
O [auth BO]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
O [auth BO]	IPR021132	Large ribosomal subunit protein eL18, conserved site	Conserved Site
O [auth BO]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
O [auth BO]	IPR000039	Large ribosomal subunit protein eL18	Family
O [auth BO]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
N [auth BN]	IPR005485	Large ribosomal subunit protein uL18, eukaryota/archaea	Family
M [auth BM]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
M [auth BM]	IPR020925	Large ribosomal subunit protein eL15, conserved site	Conserved Site
M [auth BM]	IPR024794	Large ribosomal subunit protein eL15 core domain superfamily	Homologous Superfamily
M [auth BM]	IPR020926	Large ribosomal subunit protein eL15, archaeal	Family
M [auth BM]	IPR000439	Large ribosomal subunit protein eL15	Family
L [auth BL]	IPR027386	Ribosomal uL15, N-terminal	Homologous Superfamily
L [auth BL]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
L [auth BL]	IPR030878	Large ribosomal subunit protein uL15	Family
L [auth BL]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
L [auth BL]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
K [auth BK]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
K [auth BK]	IPR000218	Large ribosomal subunit protein uL14	Family
K [auth BK]	IPR019971	Large ribosomal subunit protein uL14, archaea	Family
K [auth BK]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
J [auth BJ]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
J [auth BJ]	IPR005822	Large ribosomal subunit protein uL13	Family
J [auth BJ]	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
J [auth BJ]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
J [auth BJ]	IPR005755	Large ribosomal subunit protein uL13, eukaryota/archaea	Family