Annotations: 9NO2

CryoEM structure of RibD-enolase complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D		e9no2D1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: Hypothetical protein YqbG-like	F:	ECOD (v295.2)
C	Enolase_C, MAAL_C	e9no2C1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Enolase_C, MAAL_C	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D	Riboflavin biosynthesis protein RibD	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines hydrolase activity catalytic activity deaminase activity diaminohydroxyphosphoribosylaminopyrimidine deaminase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 5-amino-6-(5-phosphoribosylamino)uracil reductase activity oxidoreductase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors cation binding transition metal ion binding zinc ion binding ion binding hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines hydrolase activity catalytic activity deaminase activity diaminohydroxyphosphoribosylaminopyrimidine deaminase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 5-amino-6-(5-phosphoribosylamino)uracil reductase activity oxidoreductase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	water-soluble vitamin biosynthetic process small molecule biosynthetic process flavin-containing compound metabolic process vitamin biosynthetic process riboflavin biosynthetic process vitamin metabolic process flavin-containing compound biosynthetic process biosynthetic process metabolic process cellular process small molecule metabolic process riboflavin metabolic process	-
A, C	Enolase	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding hydro-lyase activity lyase activity phosphopyruvate hydratase activity catalytic activity carbon-oxygen lyase activity	ribonucleotide catabolic process pyridine nucleotide catabolic process aerobic respiration oxoacid metabolic process carbohydrate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process nucleoside phosphate catabolic process nucleobase-containing compound metabolic process glycolytic process pyridine-containing compound metabolic process small molecule metabolic process purine ribonucleotide catabolic process phosphorus metabolic process ribonucleotide catabolic process pyridine nucleotide catabolic process aerobic respiration oxoacid metabolic process carbohydrate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process nucleoside phosphate catabolic process nucleobase-containing compound metabolic process glycolytic process pyridine-containing compound metabolic process small molecule metabolic process purine ribonucleotide catabolic process phosphorus metabolic process nucleoside phosphate metabolic process nicotinamide nucleotide metabolic process pyruvate metabolic process purine nucleoside diphosphate metabolic process primary metabolic process purine-containing compound catabolic process nucleotide metabolic process nucleobase-containing compound catabolic process nucleoside diphosphate metabolic process purine nucleoside diphosphate catabolic process nucleoside diphosphate catabolic process metabolic process nucleoside triphosphate metabolic process monocarboxylic acid metabolic process purine ribonucleotide metabolic process pyridine-containing compound catabolic process ribose phosphate metabolic process cellular respiration catabolic process ATP metabolic process energy derivation by oxidation of organic compounds purine nucleotide metabolic process ribonucleotide metabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process ribonucleoside diphosphate metabolic process ribonucleoside diphosphate catabolic process nucleotide catabolic process purine nucleoside triphosphate metabolic process purine nucleotide catabolic process carbohydrate metabolic process carbohydrate derivative catabolic process ADP catabolic process carboxylic acid metabolic process generation of precursor metabolites and energy purine-containing compound metabolic process ADP metabolic process organophosphate metabolic process purine ribonucleoside diphosphate metabolic process cellular process purine ribonucleoside diphosphate catabolic process	cell surface cellular anatomical structure protein-containing complex intracellular anatomical structure catalytic complex phosphopyruvate hydratase complex cytoplasm cytosol extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, D	IPR024072	Dihydrofolate reductase-like domain superfamily	Homologous Superfamily
B, D	IPR050765	Riboflavin Biosynthesis HTP Reductase	Family
B, D	IPR004794	Riboflavin biosynthesis protein RibD	Family
B, D	IPR002125	Cytidine and deoxycytidylate deaminase domain	Domain
B, D	IPR002734	Bacterial bifunctional deaminase-reductase, C-terminal	Domain
B, D	IPR016192	APOBEC/CMP deaminase, zinc-binding	Binding Site
B, D	IPR016193	Cytidine deaminase-like	Homologous Superfamily
A, C	IPR020809	Enolase, conserved site	Conserved Site
A, C	IPR020810	Enolase, C-terminal TIM barrel domain	Domain
A, C	IPR020811	Enolase, N-terminal	Domain
A, C	IPR000941	Enolase	Family
A, C	IPR029017	Enolase-like, N-terminal	Homologous Superfamily
A, C	IPR036849	Enolase-like, C-terminal domain superfamily	Homologous Superfamily