9NKL | pdb_00009nkl

E. coli 70S initiation complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth 13]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
H [auth 2]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
H [auth 2]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
I [auth 20]SCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
P [auth 28]SCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
S [auth 30]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
Z [auth 5]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
AA [auth 6]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
AA [auth 6]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)
KA [auth sf]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
RA [auth sm]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
SA [auth sn]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
VA [auth sq]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
XA [auth ss]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
ZA [auth su]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
BB [auth 33]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
G [auth 19]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
F [auth 18]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
E [auth 17]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
UA [auth sp]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
TA [auth so]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
QA [auth sl]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)
PA [auth sk]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
OA [auth sj]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
NA [auth si]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
D [auth 16]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
MA [auth sh]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
LA [auth sg]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
IA [auth sd]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
GA [auth sb]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
C [auth 15]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
BA [auth 9]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8032958 3000329 SCOP2B (2022-06-29)
BA [auth 9]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
Y [auth 4]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
X [auth 36]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
W [auth 35]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
U [auth 32]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
T [auth 31]SCOP2B SuperfamilyL28p-like 8032740 3001966 SCOP2B (2022-06-29)
B [auth 14]SCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
R [auth 3]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
Q [auth 29]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
O [auth 27]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
N [auth 25]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
M [auth 24]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
L [auth 23]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
K [auth 22]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
J [auth 21]SCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 13]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
H [auth 2]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
H [auth 2]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
I [auth 20]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
P [auth 28]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
S [auth 30]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
V [auth 34]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
Z [auth 5]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
Z [auth 5]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
AA [auth 6]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
BB [auth 33]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
G [auth 19]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
F [auth 18]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
E [auth 17]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
D [auth 16]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
C [auth 15]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
BA [auth 9]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
BA [auth 9]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
Y [auth 4]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
X [auth 36]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
W [auth 35]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
U [auth 32]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
T [auth 31]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
B [auth 14]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
R [auth 3]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
Q [auth 29]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
O [auth 27]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
N [auth 25]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
M [auth 24]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
M [auth 24]PF00467KOW motif (KOW)KOW motif- Family
L [auth 23]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
K [auth 22]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
J [auth 21]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 13]Large ribosomal subunit protein uL13
H [auth 2]50S ribosomal protein L2
I [auth 20]Large ribosomal subunit protein bL20
P [auth 28]50S ribosomal protein L28
S [auth 30]50S ribosomal protein L30
V [auth 34]50S ribosomal protein L34
Z [auth 5]50S ribosomal protein L5
AA [auth 6]Large ribosomal subunit protein uL6
EA [auth R2]5S ribosomal RNA---
HA [auth sc]Small ribosomal subunit protein uS3
KA [auth sf]30S ribosomal protein S6, non-modified isoform
RA [auth sm]30S ribosomal protein S13
SA [auth sn]Small ribosomal subunit protein uS14
VA [auth sq]Small ribosomal subunit protein uS17
XA [auth ss]30S ribosomal protein S19
ZA [auth su]Small ribosomal subunit protein bS21
BB [auth 33]Large ribosomal subunit protein bL33
G [auth 19]50S ribosomal protein L19
F [auth 18]Large ribosomal subunit protein uL18
AB [auth T]tRNA---
YA [auth st]30S ribosomal protein S20
E [auth 17]Large ribosomal subunit protein bL17
WA [auth sr]30S ribosomal protein S18
UA [auth sp]Small ribosomal subunit protein bS16
TA [auth so]Small ribosomal subunit protein uS15
QA [auth sl]Small ribosomal subunit protein uS12
PA [auth sk]Small ribosomal subunit protein uS11
OA [auth sj]30S ribosomal protein S10
NA [auth si]Small ribosomal subunit protein uS9
D [auth 16]50S ribosomal protein L16
MA [auth sh]30S ribosomal protein S8
LA [auth sg]30S ribosomal protein S7
JA [auth se]Small ribosomal subunit protein uS5
IA [auth sd]30S ribosomal protein S4
GA [auth sb]Small ribosomal subunit protein uS2
FA [auth R3]16S ribosomal RNA---
DA [auth R1]23S ribosomal RNA---
C [auth 15]Large ribosomal subunit protein uL15
CA [auth M]mRNA---
BA [auth 9]Large ribosomal subunit protein bL9
Y [auth 4]Large ribosomal subunit protein uL4
X [auth 36]50S ribosomal protein L36
W [auth 35]Large ribosomal subunit protein bL35
U [auth 32]50S ribosomal protein L32
T [auth 31]Large ribosomal subunit protein bL31
B [auth 14]50S ribosomal protein L14
R [auth 3]50S ribosomal protein L3
Q [auth 29]Large ribosomal subunit protein uL29
O [auth 27]Large ribosomal subunit protein bL27
N [auth 25]Large ribosomal subunit protein bL25
M [auth 24]Large ribosomal subunit protein uL24
L [auth 23]Large ribosomal subunit protein uL23
K [auth 22]Large ribosomal subunit protein uL22
J [auth 21]Large ribosomal subunit protein bL21

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 13]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
A [auth 13]IPR005822Large ribosomal subunit protein uL13Family
A [auth 13]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
A [auth 13]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
H [auth 2]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
H [auth 2]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
H [auth 2]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth 2]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth 2]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
H [auth 2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
H [auth 2]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
H [auth 2]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
H [auth 2]IPR002171Large ribosomal subunit protein uL2Family
I [auth 20]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
I [auth 20]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
I [auth 20]IPR005813Large ribosomal subunit protein bL20Family
P [auth 28]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
P [auth 28]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
P [auth 28]IPR026569Large ribosomal subunit protein bL28Family
P [auth 28]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
S [auth 30]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
S [auth 30]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
S [auth 30]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
S [auth 30]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
V [auth 34]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
V [auth 34]IPR000271Large ribosomal subunit protein bL34Family
Z [auth 5]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
Z [auth 5]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
Z [auth 5]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
Z [auth 5]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
Z [auth 5]IPR002132Large ribosomal subunit protein uL5Family
Z [auth 5]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
AA [auth 6]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
AA [auth 6]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
AA [auth 6]IPR000702Large ribosomal subunit protein uL6-likeFamily
AA [auth 6]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
AA [auth 6]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
HA [auth sc]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
HA [auth sc]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
HA [auth sc]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
HA [auth sc]IPR004087K Homology domainDomain
HA [auth sc]IPR004044K Homology domain, type 2Domain
HA [auth sc]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
HA [auth sc]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
HA [auth sc]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
KA [auth sf]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
KA [auth sf]IPR000529Small ribosomal subunit protein bS6Family
KA [auth sf]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
KA [auth sf]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
KA [auth sf]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
RA [auth sm]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
RA [auth sm]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
RA [auth sm]IPR001892Small ribosomal subunit protein uS13Family
RA [auth sm]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
RA [auth sm]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
SA [auth sn]IPR001209Small ribosomal subunit protein uS14Family
SA [auth sn]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
SA [auth sn]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
VA [auth sq]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
VA [auth sq]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
VA [auth sq]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
VA [auth sq]IPR000266Small ribosomal subunit protein uS17Family
XA [auth ss]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
XA [auth ss]IPR002222Small ribosomal subunit protein uS19Family
XA [auth ss]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
XA [auth ss]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
ZA [auth su]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
ZA [auth su]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
ZA [auth su]IPR001911Small ribosomal subunit protein bS21Family
BB [auth 33]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BB [auth 33]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BB [auth 33]IPR001705Large ribosomal subunit protein bL33Family
BB [auth 33]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
G [auth 19]IPR001857Large ribosomal subunit protein bL19Family
G [auth 19]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
G [auth 19]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
G [auth 19]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
F [auth 18]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
F [auth 18]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
YA [auth st]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
YA [auth st]IPR002583Small ribosomal subunit protein bS20Family
E [auth 17]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
E [auth 17]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
E [auth 17]IPR000456Large ribosomal subunit protein bL17Family
WA [auth sr]IPR001648Small ribosomal subunit protein bS18Family
WA [auth sr]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
WA [auth sr]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
UA [auth sp]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
UA [auth sp]IPR000307Small ribosomal subunit protein bS16Family
UA [auth sp]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
TA [auth so]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
TA [auth so]IPR000589Small ribosomal subunit protein uS15Family
TA [auth so]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
QA [auth sl]IPR005679Ribosomal protein uS12, bacteriaFamily
QA [auth sl]IPR006032Small ribosomal subunit protein uS12Family
QA [auth sl]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
PA [auth sk]IPR001971Small ribosomal subunit protein uS11Family
PA [auth sk]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
PA [auth sk]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
PA [auth sk]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
OA [auth sj]IPR027486Small ribosomal subunit protein uS10 domainDomain
OA [auth sj]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
OA [auth sj]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
OA [auth sj]IPR001848Small ribosomal subunit protein uS10Family
NA [auth si]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
NA [auth si]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
NA [auth si]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
NA [auth si]IPR000754Small ribosomal subunit protein uS9Family
NA [auth si]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
D [auth 16]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
D [auth 16]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
D [auth 16]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
D [auth 16]IPR016180Large ribosomal subunit protein uL16 domainDomain
D [auth 16]IPR047873Large ribosomal subunit protein uL16Family
MA [auth sh]IPR000630Small ribosomal subunit protein uS8Family
MA [auth sh]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
MA [auth sh]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
LA [auth sg]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
LA [auth sg]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
LA [auth sg]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
LA [auth sg]IPR000235Small ribosomal subunit protein uS7Family
LA [auth sg]IPR023798Small ribosomal subunit protein uS7 domainDomain
JA [auth se]IPR000851Small ribosomal subunit protein uS5Family
JA [auth se]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
JA [auth se]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
JA [auth se]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
JA [auth se]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
JA [auth se]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
JA [auth se]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IA [auth sd]IPR002942RNA-binding S4 domainDomain
IA [auth sd]IPR022801Small ribosomal subunit protein uS4Family
IA [auth sd]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
IA [auth sd]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
IA [auth sd]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IA [auth sd]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
GA [auth sb]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
GA [auth sb]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
GA [auth sb]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
GA [auth sb]IPR001865Small ribosomal subunit protein uS2Family
C [auth 15]IPR021131Large ribosomal subunit protein uL15/eL18Domain
C [auth 15]IPR030878Large ribosomal subunit protein uL15Family
C [auth 15]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
C [auth 15]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
C [auth 15]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
BA [auth 9]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
BA [auth 9]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
BA [auth 9]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
BA [auth 9]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
BA [auth 9]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
BA [auth 9]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
BA [auth 9]IPR000244Large ribosomal subunit protein bL9Family
Y [auth 4]IPR013005Large ribosomal subunit protein uL4-likeFamily
Y [auth 4]IPR002136Large ribosomal subunit protein uL4Family
Y [auth 4]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
X [auth 36]IPR000473Large ribosomal subunit protein bL36Family
X [auth 36]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
W [auth 35]IPR021137Large ribosomal subunit protein bL35-likeFamily
W [auth 35]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
W [auth 35]IPR001706Large ribosomal subunit protein bL35Family
W [auth 35]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
U [auth 32]IPR002677Large ribosomal subunit protein bL32Family
U [auth 32]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
U [auth 32]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
T [auth 31]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
T [auth 31]IPR027491Large ribosomal subunit protein bL31 type AFamily
T [auth 31]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
T [auth 31]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
B [auth 14]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
B [auth 14]IPR000218Large ribosomal subunit protein uL14Family
B [auth 14]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
B [auth 14]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
R [auth 3]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
R [auth 3]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
R [auth 3]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
R [auth 3]IPR000597Large ribosomal subunit protein uL3Family
Q [auth 29]IPR050063Universal ribosomal protein uL29Family
Q [auth 29]IPR001854Large ribosomal subunit protein uL29Family
Q [auth 29]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
Q [auth 29]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
O [auth 27]IPR001684Large ribosomal subunit protein bL27Family
O [auth 27]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
N [auth 25]IPR020055Ribosomal protein bL25, short-formFamily
N [auth 25]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
N [auth 25]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
N [auth 25]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
N [auth 25]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
M [auth 24]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
M [auth 24]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
M [auth 24]IPR003256Large ribosomal subunit protein uL24Family
M [auth 24]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
M [auth 24]IPR005824KOWDomain
M [auth 24]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
L [auth 23]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
L [auth 23]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
L [auth 23]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
L [auth 23]IPR013025Large ribosomal subunit protein uL23-likeFamily
K [auth 22]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
K [auth 22]IPR001063Large ribosomal subunit protein uL22Family
K [auth 22]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
K [auth 22]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
K [auth 22]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
J [auth 21]IPR028909Large ribosomal subunit protein bL21-likeFamily
J [auth 21]IPR001787Large ribosomal subunit protein bL21Family
J [auth 21]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
J [auth 21]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
AB [auth T]4OC Parent Component: C

AB [auth T]4SU Parent Component: U

AB [auth T]FME Parent Component: MET

RESIDAA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
AB [auth T]H2U Parent Component: U

RESIDAA0021 , AA0566

AB [auth T]MUM RESIDAA0021 , AA0566

AB [auth T]PSU Parent Component: U

RESIDAA0021 , AA0566