9NGV | pdb_00009ngv

In situ cryo-EM structure of periplasmic ring (PR) of the Legionella Dot/Icm T4SS machine.

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
ZC [auth Dz]	Cofilin_ADF	e9ngvDz1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
XB [auth Cx]	Cofilin_ADF	e9ngvCx1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
VA [auth Bv]	Cofilin_ADF	e9ngvBv1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
UD [auth Eu]	Cofilin_ADF	e9ngvEu1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
T [auth At]	Cofilin_ADF	e9ngvAt1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
SC [auth Ds]	Cofilin_ADF	e9ngvDs1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
QB [auth Cq]	Cofilin_ADF	e9ngvCq1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
OA [auth Bo]	Cofilin_ADF	e9ngvBo1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
ND [auth En]	Cofilin_ADF	e9ngvEn1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
M [auth Am]	Cofilin_ADF	e9ngvAm1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
LC [auth Dl]	Cofilin_ADF	e9ngvDl1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
JB [auth Cj]	Cofilin_ADF	e9ngvCj1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
HA [auth Bh]	Cofilin_ADF	e9ngvBh1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
GD [auth Eg]	Cofilin_ADF	e9ngvEg1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
F [auth Af]	Cofilin_ADF	e9ngvAf1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
EC [auth De]	Cofilin_ADF	e9ngvDe1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
CB [auth Cc]	Cofilin_ADF	e9ngvCc1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)
AA [auth Ba]	Cofilin_ADF	e9ngvBa1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Cofilin_ADF	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AD [auth Ea], BA [auth Bb], DB [auth Cd], FC [auth Df], G [auth Ag], AD [auth Ea], BA [auth Bb], DB [auth Cd], FC [auth Df], G [auth Ag], HD [auth Eh], IA [auth Bi], KB [auth Ck], MC [auth Dm], N [auth An], OD [auth Eo], PA [auth Bp], RB [auth Cr], TC [auth Dt], U [auth Au], VD [auth Ev], WA [auth Bw], YB [auth Cy]	IcmK (DotH)	-	-	-
AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], HA [auth Bh], JB [auth Cj], LC [auth Dl], M [auth Am], ND [auth En], OA [auth Bo], QB [auth Cq], SC [auth Ds], T [auth At], UD [auth Eu], VA [auth Bv], XB [auth Cx], ZC [auth Dz]	IcmE (DotG)	-	-	cellular anatomical structure membrane
BB [auth Cb], DC [auth Dd], E [auth Ae], FD [auth Ef], GA [auth Bg], BB [auth Cb], DC [auth Dd], E [auth Ae], FD [auth Ef], GA [auth Bg], IB [auth Ci], KC [auth Dk], L [auth Al], MD [auth Em], NA [auth Bn], PB [auth Cp], RC [auth Dr], S [auth As], TD [auth Et], UA [auth Bu], WB [auth Cw], YC [auth Dy], Z [auth Az]	IcmG (DotF)	-	-	-
AB [auth Ca], CC [auth Dc], D [auth Ad], ED [auth Ee], FA [auth Bf], AB [auth Ca], CC [auth Dc], D [auth Ad], ED [auth Ee], FA [auth Bf], HB [auth Ch], JC [auth Dj], K [auth Ak], LD [auth El], MA [auth Bm], OB [auth Co], QC [auth Dq], R [auth Ar], SD [auth Es], TA [auth Bt], VB [auth Cv], XC [auth Dx], Y [auth Ay]	unknown peptide D	-	-	-
BC [auth Db], C [auth Ac], DD [auth Ed], EA [auth Be], GB [auth Cg], BC [auth Db], C [auth Ac], DD [auth Ed], EA [auth Be], GB [auth Cg], IC [auth Di], J [auth Aj], KD [auth Ek], LA [auth Bl], NB [auth Cn], PC [auth Dp], Q [auth Aq], RD [auth Er], SA [auth Bs], UB [auth Cu], WC [auth Dw], X [auth Ax], ZA [auth Bz]	unknown peptide C	-	-	-
AC [auth Da], B [auth Ab], CD [auth Ec], DA [auth Bd], FB [auth Cf], AC [auth Da], B [auth Ab], CD [auth Ec], DA [auth Bd], FB [auth Cf], HC [auth Dh], I [auth Ai], JD [auth Ej], KA [auth Bk], MB [auth Cm], OC [auth Do], P [auth Ap], QD [auth Eq], RA [auth Br], TB [auth Ct], VC [auth Dv], W [auth Aw], YA [auth By]	unknown peptide B	-	-	-
A [auth Aa], BD [auth Eb], CA [auth Bc], EB [auth Ce], GC [auth Dg], A [auth Aa], BD [auth Eb], CA [auth Bc], EB [auth Ce], GC [auth Dg], H [auth Ah], ID [auth Ei], JA [auth Bj], LB [auth Cl], NC [auth Dn], O [auth Ao], PD [auth Ep], QA [auth Bq], SB [auth Cs], UC [auth Du], V [auth Av], XA [auth Bx], ZB [auth Cz]	unknown peptide A	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AD [auth Ea], BA [auth Bb], DB [auth Cd], FC [auth Df], G [auth Ag], AD [auth Ea], BA [auth Bb], DB [auth Cd], FC [auth Df], G [auth Ag], HD [auth Eh], IA [auth Bi], KB [auth Ck], MC [auth Dm], N [auth An], OD [auth Eo], PA [auth Bp], RB [auth Cr], TC [auth Dt], U [auth Au], VD [auth Ev], WA [auth Bw], YB [auth Cy]	IPR022073	Putative outer membrane core complex of type IVb secretion	Family
AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], HA [auth Bh], JB [auth Cj], LC [auth Dl], M [auth Am], ND [auth En], OA [auth Bo], QB [auth Cq], SC [auth Ds], T [auth At], UD [auth Eu], VA [auth Bv], XB [auth Cx], ZC [auth Dz]	IPR053285	Thylakoid lumenal pentapeptide repeat protein	Family
AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], HA [auth Bh], JB [auth Cj], LC [auth Dl], M [auth Am], ND [auth En], OA [auth Bo], QB [auth Cq], SC [auth Ds], T [auth At], UD [auth Eu], VA [auth Bv], XB [auth Cx], ZC [auth Dz]	IPR042217	Type IV secretion system, VirB10/TrbI	Homologous Superfamily
AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], HA [auth Bh], JB [auth Cj], LC [auth Dl], M [auth Am], ND [auth En], OA [auth Bo], QB [auth Cq], SC [auth Ds], T [auth At], UD [auth Eu], VA [auth Bv], XB [auth Cx], ZC [auth Dz]	IPR057481	Decapeptide repeat	Repeat
AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], HA [auth Bh], JB [auth Cj], LC [auth Dl], M [auth Am], ND [auth En], OA [auth Bo], QB [auth Cq], SC [auth Ds], T [auth At], UD [auth Eu], VA [auth Bv], XB [auth Cx], ZC [auth Dz]	IPR049855	DotG/IcmE-like, C-terminal domain	Domain
AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], AA [auth Ba], CB [auth Cc], EC [auth De], F [auth Af], GD [auth Eg], HA [auth Bh], JB [auth Cj], LC [auth Dl], M [auth Am], ND [auth En], OA [auth Bo], QB [auth Cq], SC [auth Ds], T [auth At], UD [auth Eu], VA [auth Bv], XB [auth Cx], ZC [auth Dz]	IPR005498	Type IV secretion system, VirB10/TraB/TrbI	Family