Annotations: 9NDM

Fab1525 in complex with the C-terminal alpha-TSR domain of the P. falciparum circumsporozoite protein

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D [auth C]	SCOP2B Superfamily	Immunoglobulin-binding domains-like	8072912	3000399	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth A]	PF00090	Thrombospondin type 1 domain (TSP_1)	Thrombospondin type 1 domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth C]	Immunoglobulin G-binding protein G	-	-	-
C [auth A]	Circumsporozoite protein	host cell surface binding binding protein binding heparan sulfate proteoglycan binding proteoglycan binding carbohydrate derivative binding	biological process involved in interspecies interaction between organisms symbiont entry into host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell viral process viral life cycle entry into host cell by a symbiont-containing vacuole	cell surface cellular anatomical structure cell periphery plasma membrane membrane intracellular anatomical structure cytoplasm
B [auth L]	Fab1525 light chain	-	-	-
A [auth H]	Fab1525 heavy chain	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D [auth C]	IPR009063	Immunoglobulin/albumin-binding domain superfamily	Homologous Superfamily
D [auth C]	IPR000724	IgG-binding protein G, B domain	Domain
D [auth C]	IPR005877	YSIRK Gram-positive signal peptide	Domain
D [auth C]	IPR019950	M protein-type anchor motif	Conserved Site
D [auth C]	IPR035152	GA-like domain	Domain
D [auth C]	IPR019931	LPXTG cell wall anchor motif	Conserved Site
C [auth A]	IPR051860	Plasmodium_CSP_Invasion	Unknown
C [auth A]	IPR000884	Thrombospondin type-1 (TSP1) repeat	Repeat
C [auth A]	IPR003067	Plasmodium circumsporozoite protein	Family
C [auth A]	IPR036383	Thrombospondin type-1 repeat superfamily	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A [auth H]	PCA	Parent Component: GLN : AA0031 : 2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420