9N6B | pdb_00009n6b

Structure of the retron IA complex with HNH nuclease in the "up" orientation

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
H [auth I]	Retron IA ncRNA	-	-	-
G [auth H]	Retron IA msDNA	-	-	-
F	TIGR02646 family protein	-	-	-
E	RNA-directed DNA polymerase	RNA-directed DNA polymerase activity catalytic activity, acting on DNA DNA polymerase activity catalytic activity, acting on a nucleic acid transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups RNA binding binding nucleic acid binding	biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus	-
A, B, C, D	AAA family ATPase	-	cellular response to stimulus double-strand break repair response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process macromolecule metabolic process DNA repair cellular response to stimulus double-strand break repair response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process macromolecule metabolic process DNA repair nucleobase-containing compound biosynthetic process DNA synthesis involved in DNA repair macromolecule biosynthetic process nucleic acid biosynthetic process biosynthetic process DNA biosynthetic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F	IPR013467	Retron Ec78 putative HNH endonuclease-like	Family
F	IPR053575	Retron Ec78 HNH endonuclease	Family
E	IPR000477	Reverse transcriptase domain	Domain
E	IPR051083	Group II Intron Splicing and Mobility/Defense	Family
E	IPR000123	RNA-directed DNA polymerase (reverse transcriptase), msDNA	Family
E	IPR043502	DNA/RNA polymerase superfamily	Homologous Superfamily
A, B, C, D	IPR041685	Endonuclease GajA/Old nuclease/RecF-like, AAA domain	Domain
A, B, C, D	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.