9MOT | pdb_00009mot

Cryo-EM structure of factor Va bound to activated protein C


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth D]SCOP2B SuperfamilyTrypsin-like serine proteases 8042258 3000114 SCOP2B (2022-06-29)
BSCOP2B Superfamilygalactose-binding domain-like 8041135 3000087 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth D]PF00089Trypsin (Trypsin)TrypsinDomain
PF00754F5/8 type C domain (F5_F8_type_C)F5/8 type C domainThis domain is also known as the discoidin (DS) domain family [1]. Domain
PF07732Multicopper oxidase (Cu-oxidase_3)Multicopper oxidaseThis entry contains many divergent copper oxidase-like domains that are not recognised by the Pfam:PF00394 model. Domain
PF07732Multicopper oxidase (Cu-oxidase_3)Multicopper oxidaseThis entry contains many divergent copper oxidase-like domains that are not recognised by the Pfam:PF00394 model. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth D]Vitamin K-dependent protein C heavy chain
Coagulation factor Va light chain
Coagulation factor Va heavy chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth D]IPR000294Gamma-carboxyglutamic acid-rich (GLA) domainDomain
C [auth D]IPR018097EGF-like calcium-binding, conserved siteConserved Site
C [auth D]IPR000742EGF-like domainDomain
C [auth D]IPR018114Serine proteases, trypsin family, histidine active siteActive Site
C [auth D]IPR050442Peptidase S1 family, coagulation factorsFamily
C [auth D]IPR009003Peptidase S1, PA clanHomologous Superfamily
C [auth D]IPR017857Coagulation factor-like, Gla domain superfamilyHomologous Superfamily
C [auth D]IPR001314Peptidase S1A, chymotrypsin familyFamily
C [auth D]IPR033116Serine proteases, trypsin family, serine active siteActive Site
C [auth D]IPR001254Serine proteases, trypsin domainDomain
C [auth D]IPR035972Gamma-carboxyglutamic acid-rich (GLA) domain superfamilyHomologous Superfamily
C [auth D]IPR001881EGF-like calcium-binding domainDomain
C [auth D]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
C [auth D]IPR000152EGF-type aspartate/asparagine hydroxylation sitePTM
C [auth D]IPR012224Peptidase S1A, coagulation factor VII/IX/X/C/ZFamily
IPR033138Multicopper oxidases, conserved siteConserved Site
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
IPR011707Multicopper oxidase-like, N-terminalDomain
IPR024715Coagulation factor 5/8-likeFamily
IPR000421Coagulation factor 5/8, C-terminal domainDomain
IPR008972CupredoxinHomologous Superfamily
IPR050633Neuropilin/Multicopper Oxidase/Coagulation FactorFamily
IPR033138Multicopper oxidases, conserved siteConserved Site
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
IPR011707Multicopper oxidase-like, N-terminalDomain
IPR024715Coagulation factor 5/8-likeFamily
IPR000421Coagulation factor 5/8, C-terminal domainDomain
IPR008972CupredoxinHomologous Superfamily
IPR050633Neuropilin/Multicopper Oxidase/Coagulation FactorFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth D]PharosP04070
PharosP12259
PharosP12259