9MET | pdb_00009met

CXCR4-HIV-2/gp120-CD4


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth S]SCOP2B SuperfamilyG protein-coupled receptor-like 8091230 3000473 SCOP2B (2022-06-29)
D [auth S]SCOP2B SuperfamilyG protein-coupled receptor-like 8091230 3000473 SCOP2B (2022-06-29)
C [auth O]SCOP2B SuperfamilyG protein-coupled receptor-like 8091230 3000473 SCOP2B (2022-06-29)
C [auth O]SCOP2B SuperfamilyG protein-coupled receptor-like 8091230 3000473 SCOP2B (2022-06-29)
B [auth N]SCOP2B SuperfamilyG protein-coupled receptor-like 8091230 3000473 SCOP2B (2022-06-29)
B [auth N]SCOP2B SuperfamilyG protein-coupled receptor-like 8091230 3000473 SCOP2B (2022-06-29)
A [auth M]SCOP2B SuperfamilyG protein-coupled receptor-like 8091230 3000473 SCOP2B (2022-06-29)
A [auth M]SCOP2B SuperfamilyG protein-coupled receptor-like 8091230 3000473 SCOP2B (2022-06-29)
G [auth A]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054493 3000071 SCOP2B (2022-06-29)
G [auth A]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054739 3000071 SCOP2B (2022-06-29)
E [auth R]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054493 3000071 SCOP2B (2022-06-29)
E [auth R]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054739 3000071 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth M],
B [auth N],
C [auth O],
D [auth S]
PF000017 transmembrane receptor (rhodopsin family) (7tm_1)7 transmembrane receptor (rhodopsin family)This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GC ...This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins [1].
Domain
E [auth R],
G [auth A]
PF05790Immunoglobulin C2-set domain (C2-set)Immunoglobulin C2-set domainDomain
E [auth R],
G [auth A]
PF00047Immunoglobulin domain (ig)Immunoglobulin domainMembers of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prote ...Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth M],
B [auth N],
C [auth O],
D [auth S]
C-X-C chemokine receptor type 4
E [auth R],
G [auth A]
T-cell surface glycoprotein CD4
F [auth T],
H [auth Q]
HIV-1/gp120

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth M],
B [auth N],
C [auth O],
D [auth S]
IPR000355Chemokine receptor familyFamily
A [auth M],
B [auth N],
C [auth O],
D [auth S]
IPR022726CXC chemokine receptor 4 N-terminal domainDomain
A [auth M],
B [auth N],
C [auth O],
D [auth S]
IPR000276G protein-coupled receptor, rhodopsin-likeFamily
A [auth M],
B [auth N],
C [auth O],
D [auth S]
IPR017452GPCR, rhodopsin-like, 7TMDomain
A [auth M],
B [auth N],
C [auth O],
D [auth S]
IPR001277CXC chemokine receptor 4/atypical chemokine receptor 2Family
A [auth M],
B [auth N],
C [auth O],
D [auth S]
IPR050119C-C chemokine receptor type 1-9-likeFamily
E [auth R],
G [auth A]
IPR021963T cell CD4 receptor C-terminal regionDomain
E [auth R],
G [auth A]
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
E [auth R],
G [auth A]
IPR013106Immunoglobulin V-set domainDomain
E [auth R],
G [auth A]
IPR000973T-cell surface antigen CD4Family
E [auth R],
G [auth A]
IPR003599Immunoglobulin domain subtypeDomain
E [auth R],
G [auth A]
IPR008424Immunoglobulin C2-setDomain
E [auth R],
G [auth A]
IPR013151Immunoglobulin-like beta-sandwich domainDomain
E [auth R],
G [auth A]
IPR015274CD4, extracellularDomain
E [auth R],
G [auth A]
IPR013783Immunoglobulin-like foldHomologous Superfamily
E [auth R],
G [auth A]
IPR007110Immunoglobulin-like domainDomain
E [auth R],
G [auth A]
IPR003598Immunoglobulin subtype 2Domain
F [auth T],
H [auth Q]
IPR000777Human immunodeficiency virus 1, envelope glycoprotein Gp120Domain
F [auth T],
H [auth Q]
IPR036377Gp120 core superfamilyHomologous Superfamily
F [auth T],
H [auth Q]
IPR000328Retroviral envelope protein GP41-likeDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth M],
B [auth N],
C [auth O],
D [auth S]
PharosP61073
E [auth R],
G [auth A]
PharosP01730